Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car03g00946 | ATGGGATCATCGGCGTCGGAAGAAGACTTAATAATGGCGACTCTACTGCAAGCCGAACAAGCCGCCGCTATCACCACCAATTTCGCTTCTTTCCCTGAAAACATCAATAATCTGGTTCAGCAAACCCTAAAACCCTTCCTCTTCTTCAAAGCCGACGACCAATATTCGTTACAACAACAACAACAACAACAACAACAACAACAATCGGTTTTCCCGTTCCCGTTGCCCTCAACCACCGCCACCGCCACCGCCACCTCCCATCTCCTTTCCTCTCTCCTCAGATCCTCGCCTTCCTCGGTCAGGGATGCAGAAGAGAGAGGAAACGACGGCGACAACCGCAAGGGTGGATTGAGGGTGAGGACGGTGAAGATGAAGAGAATGAAAGGGAGGAGGAAAGTGAGAGAGCCGAGATTCTGCTTCAAAACCATGACGGATGTGGACGTTCTTGACGACGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTTAAGAACACCCTCCATCCAAGGAGTTACTATCGTTGCACGGAAGAGAATTGTAAGGTAAAGAAACGAGTAGAAAGATTAGCAGAAGATCCGAGAATGGTAATAACGACCTACGAAGGAAGACACGCTCATTCACCGTCCGATCCTAATTTAGAACACACCAACATGGGTTGCCTCAACACTTTGTTTTGTTAG | 681 | 48.02 | MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQQQQQQQQQSVFPFPLPSTTATATATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7357790 | 7358624 | + | Carg00909-RA | Car03g00946 | 144998 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car03g00946 | 226 | MobiDBLite | consensus disorder prediction | 99 | 116 | - | - | |
Car03g00946 | 226 | ProSiteProfiles | WRKY domain profile. | 144 | 209 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car03g00946 | 226 | Pfam | WRKY DNA -binding domain | 150 | 206 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car03g00946 | 226 | MobiDBLite | consensus disorder prediction | 92 | 116 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car03g00946 | Car20g00950 | CCT | |
Car02g00417 | Car03g00946 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car03g00946 | Car-Chr3:7357790 | Car17g00350 | Car-Chr17:2214403 | 4.63E-37 | dispersed | |
Car06g00779 | Car-Chr6:6012452 | Car03g00946 | Car-Chr3:7357790 | 3.37E-49 | transposed | |
Car12g00609 | Car-Chr12:4142433 | Car03g00946 | Car-Chr3:7357790 | 1.62E-49 | transposed | |
Car02g00417 | Car-Chr2:3278398 | Car03g00946 | Car-Chr3:7357790 | 2.21E-24 | wgd | |
Car20g00950 | Car-Chr20:10898379 | Car03g00946 | Car-Chr3:7357790 | 3.10E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3179 | PF03106 | WRKY | 4.40E-25 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car03g00946 | - | - | cpep:111804309 | 344.739 |