Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00947 ATGATACCCTTTTTTCTCAGGCTCTGTTTCTTCTTCCTTCTTCTTCTTCTTCTTCTTCTTTCCTTCTCTGCTTCCTCTGCAACTTCTTCTTCTTCCTCTCATGGAGACACCCAGAAGCTTATTTCCTTCAAATCTTCACTTCCAAGCCCAGCCCTGCTTCAAAACTGGCTCTCCAATGCCGACCCATGTTCCTTTTCTGGTATTACTTGTAAGGAAACCAGAGTTTCTGCCATAGACTTGAGCTTTTTGTCTTTGAGCTCTAATTTCAGCCATGTTTTCTCCTTGCTTGCGGCGCTCGACCATTTGGAATCGCTTTCTCTCAAATCCACTAACCTTACTGGCTCCATTTCTTTGCCCTCTGGATTCAAGTGTAGCCCTCTGCTTTCCTCTGTAGATCTGTCCGTCAATGGCTTATTTGGGTCTGTTTCTGATGTTTCTAACTTGGGATTTTGCGCCAATCTCAAGTCGCTTAATCTGTCCTTTAACTATTTTGATTTTCCACTTAAAGACTCTGTCCCACGATTCAACCTCGATTTGCAGGTCCTCGATCTTTCTTCCAACCGGATTGTTGGGTCGAAATTAGTTCCATGGATTTTCTCTGGTGGGTGTGGTAATTTGCAGCTCTTGGCATTGAAGGCCAACAAAATTAGCGGTGAGATTAATCTCTCGTCGTGTAATAAACTCGAGCATTTGGATATCTCCGGCAACAATTTCTCTGTGGGTATTCCGTCCTTAGGCGATTGCTCTGTTTTGGAGCATTTGGATATCTCCGGCAACAAGTTCACCGGCGACGTCGGACATGCTCTGTCGTCTTGTCTGCAACTCACCTTTCTGAATCTCTCCAGCAACCAGTTTGTGGGTCCAATCCCTTCGTTTGCATCTCCCAATTTGTGGTTCCTTTCGCTTGCTAACAACGATTTCCAGGGGGAGATTCCTGTAAGTATTGCAGATTTACGTTCTAGTTTGGTGCAGCTCGATCTTTCTTCTAATAGTTTGATTGGGTCTTTACCTTCTGCTATGGGGTCTTGTTCTTCGTTGGAAACATTGGACATTTCGAAAAACAACCTCTCTGGTGAGCTCCCCATCGCCGTTTTTGCCAAAATGAGTAGTCTCAAGAAACTCTCTGTTTCCGACAACAAGTTCTTCGGGGTTTTGTCGGATTCTCTTTCTCATCTCTCCACTTTGAATTCTTTGGATCTGAGTTCTAATAACTTTTCTGGGTCGATTCCGGCGGGGCTCTGCGAAGACCCTAACAACAGTTTGAAAGAATTGTTTCTCCAGAACAATTGGTTAACAGGTCAAATCCCTGCAAGTATTAGCAATTGTTCTCAGCTGGTTTCTCTCGATTTGAGCTTCAACTTTCTGAGTGGGACGATCCCTTCCAGCTTGGGATCACTGTCTAAGCTCAAGAACTTGATCATGTGGTTGAATCAGCTGGAGGGGGAGATCCCATCCGATTTCAGCAACTTTCAGGGGCTTGAGAATCTGATCCTGGATTTCAATGAGCTCACTGGCACAATCCCTTCAGGGTTAAGCAACTGCACCAACTTGAACTGGATTTCGTTGTCGAATAACCGGTTGAGCGGAGAGATTCCAGCCTGGATCGGCCGCCTCCCGAGCCTCGCCATCCTTAAACTCAGCAACAACTCGTTCTATGGTCGGATTCCTCCGGAGCTGGGCGATTGTCGGAGCTTGATCTGGCTTGACCTGAATACCAATTTGTTGAATGGAACAATCCCTCCTGAGTTGTTTCGTCAATCAGGTAACATTGCTGTTAACTTCATTACAGGGAAGTCTTATGCTTACATTAAGAACGATGGTAGCAAGCAGTGCCATGGCGCTGGAAATTTGCTCGAGTTTGCTGGAATTAGACAAGAACAAGTGAACAGGATTTCAAGCAAGAGTCCCTGCAATTTCACCAGAGTTTATAAAGGAATGACTCAGCCAACCTTTAACCATAATGGTTCCATGATTTTTCTTGATCTTTCCCATAATATGTTGTCTGGTAGTATCCCTAAGGCGATTGGTTCTACAAATTATCTATACATTTTGGATTTGGGACATAACAGTCTCTCGGGACCGATCCCGCAGGAGGTCGGTGGCTTGACGAAGCTCAACATTCTTGATCTATCAAGCAATGAGCTTGAAGGATCAATTCCATTGTCTTTGACAGGACTTTCCTCCCTCATGGAGATTGATCTGTCCAACAATCATCTCAATGGTTCGATACCCGAATCAGCTCAGTTCGAAACGTTCCCAGCATCGGGATTTGCGAATAATTCTGGCCTATGTGGGTATCCTCTCCCTTCATGTGGGGTTGATTCAGGAGCAAGTGCAAATTCTCAGCATCAAAGATCTCATAGGAAGCAGGCATCCCTTGCAGGGAGTGTTGCAATGGGGCTACTCTTCTCGCTTTTCTGTATTTTCGGACTGATTATTGTCGTTGTCGAGACGAGGAAGCGAAGGAAAAAGAAGGATTCTACTCTTGATACTTACGTCGAGAGTCATTCACCTCCAGGCACGACGACCACGGTTAACTGGAAGTTAACCGGTGCTCGTGAAGCATCGAGTATTAGTCTTGCAACATTTGAGAAGCCACTTCGGAAGCTTACATTTGCTGATCTCCTCAAGGCTACGAATGGCTTCCACAACGATAGCCTGATTGGTTCGGGGGGTTTCGGTGACGTATATAAGGCTCGATTGAAGGATGGAAGCACTGTCGCAATCAAGAAGCTGATTCATGTCAGTGGACAGGGTGATCGTGAGTTCACTGCAGAAATGGAAACCATTGGCAAAATCAAACACCGAAACTTGGTACCGCTTCTGGGCTACTGCAAGGTCGGAGAAGAACGGCTGCTCGTGTATGAGTACATGAAATACGGAAGCTTAGAAGACGTTTTACACGACAAGAAGAAGGGTGGAATCAAACTGAATTGGGCAGCAAGAAGGAAGATTGCCATTGGAGCTGCAAGGGGACTGGCTTTCCTTCACCACAACTGCCTACCTCACATCATTCACAGGGACATGAAATCAAGCAATGTGTTGCTGGACGAGAACTTAGAAGCCAGAGTCTCAGATTTTGGAATGGCTAGACTAATGAGTGCCATGGACACCCATTTGAGTGTCAGCACATTAGCCGGAACGCCCGGTTACGTCCCTCCCGAATATTACCAGAGCTTCCGGTGTTCTACAAAAGGCGACGTTTACAGTTACGGTGTCGTCATGCTCGAGCTCTTAACAGGAAAGCGACCCACAGACTCTGCCGATTTCGGTGACAACAATCTCGTCGGATGGGTAAAACAACACGCCAAATTGGACCTAACCGATGTGTTCGATCGGGAACTCATAAAGGAAGATCCAAGCTTGAAGATAGAGCTTTTAGAACACTTGAAGGTAGCTGTTGCGTGCTTAGACGATAGGTCGTGGCGGCGTCCAACGATGATCCAAGTAATGACAATGTTCAAGGAAATCCAAGCAGGGTCGGGGATGATGGATTCCCAATCCACGATCGGAACCGAGAACGGAGGATTCAACGTCGACATTGTAGACATGAGCTTAAAGGAAGTACCAGAACCAGAAGGCAAGTAA 3588 46.01 MIPFFLRLCFFFLLLLLLLLSFSASSATSSSSSHGDTQKLISFKSSLPSPALLQNWLSNADPCSFSGITCKETRVSAIDLSFLSLSSNFSHVFSLLAALDHLESLSLKSTNLTGSISLPSGFKCSPLLSSVDLSVNGLFGSVSDVSNLGFCANLKSLNLSFNYFDFPLKDSVPRFNLDLQVLDLSSNRIVGSKLVPWIFSGGCGNLQLLALKANKISGEINLSSCNKLEHLDISGNNFSVGIPSLGDCSVLEHLDISGNKFTGDVGHALSSCLQLTFLNLSSNQFVGPIPSFASPNLWFLSLANNDFQGEIPVSIADLRSSLVQLDLSSNSLIGSLPSAMGSCSSLETLDISKNNLSGELPIAVFAKMSSLKKLSVSDNKFFGVLSDSLSHLSTLNSLDLSSNNFSGSIPAGLCEDPNNSLKELFLQNNWLTGQIPASISNCSQLVSLDLSFNFLSGTIPSSLGSLSKLKNLIMWLNQLEGEIPSDFSNFQGLENLILDFNELTGTIPSGLSNCTNLNWISLSNNRLSGEIPAWIGRLPSLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLLNGTIPPELFRQSGNIAVNFITGKSYAYIKNDGSKQCHGAGNLLEFAGIRQEQVNRISSKSPCNFTRVYKGMTQPTFNHNGSMIFLDLSHNMLSGSIPKAIGSTNYLYILDLGHNSLSGPIPQEVGGLTKLNILDLSSNELEGSIPLSLTGLSSLMEIDLSNNHLNGSIPESAQFETFPASGFANNSGLCGYPLPSCGVDSGASANSQHQRSHRKQASLAGSVAMGLLFSLFCIFGLIIVVVETRKRRKKKDSTLDTYVESHSPPGTTTTVNWKLTGAREASSISLATFEKPLRKLTFADLLKATNGFHNDSLIGSGGFGDVYKARLKDGSTVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDKKKGGIKLNWAARRKIAIGAARGLAFLHHNCLPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVMLELLTGKRPTDSADFGDNNLVGWVKQHAKLDLTDVFDRELIKEDPSLKIELLEHLKVAVACLDDRSWRRPTMIQVMTMFKEIQAGSGMMDSQSTIGTENGGFNVDIVDMSLKEVPEPEGK 1195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7362638 7366225 - Carg00910-RA Car03g00947 144999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00947 1195 Pfam Protein kinase domain 882 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00947 1195 Pfam Brassinosteroid receptor island domain 588 652 IPR045381 -
Car03g00947 1195 ProSitePatterns Protein kinases ATP-binding region signature. 888 911 IPR017441 GO:0005524
Car03g00947 1195 ProSiteProfiles Protein kinase domain profile. 882 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00947 1195 Pfam Leucine Rich Repeat 227 244 IPR001611 GO:0005515
Car03g00947 1195 Pfam Leucine Rich Repeat 445 466 IPR001611 GO:0005515
Car03g00947 1195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1004 1016 IPR008271 GO:0004672|GO:0006468
Car03g00947 1195 Pfam Leucine rich repeat N-terminal domain 35 70 IPR013210 -
Car03g00947 1195 Pfam Leucine rich repeat 681 739 IPR001611 GO:0005515
Car03g00947 1195 Pfam Leucine rich repeat 345 405 IPR001611 GO:0005515
Car03g00947 1195 Pfam Leucine rich repeat 492 550 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00947 Car-Chr3:7362638 Car04g02087 Car-Chr4:17006651 0 dispersed
Car17g01231 Car-Chr17:9377283 Car03g00947 Car-Chr3:7362638 2.24E-07 dispersed
Car07g00755 Car-Chr7:3917881 Car03g00947 Car-Chr3:7362638 3.27E-33 transposed
Car10g00198 Car-Chr10:962190 Car03g00947 Car-Chr3:7362638 4.77E-151 transposed
Car03g00947 Car-Chr3:7362638 Car07g00754 Car-Chr7:3915981 2.00E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88737 PF00069 Pkinase 1.80E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00947 K13415 - csv:101209118 2123.21