Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00973 ATGGTGAAAGATGACTTGTGTATTACGATTCCGAGCGATTTCAGGTGTCCGATCTCGTTAGATGTGATGAAATCTCCGGTCAGTTTGTGCACCGGAGTGACGTACGATCGTTCCAGTATCCAGAAATGGCTCGACAATGGAAACAATACTTGTCCGGCCACCATGCAGGTCCTTCAAACCAAGGAGTTCGTCCCTAACCATAATCTCCACCGCCTCATTCAGATTTGGTCTGATTCCTTTCGCCAACGACTCCACTCGCCTGATTCCTCCCCTGTTTCTGACTCGGCTCTCTCCTCAGATCATGTTCTCCGCCTTCTCAAGCGTATGGAGGACGATAAATTACGCGCTGATTCGTTGTCGAGGCTTGTTTCTTTTGCAGCGCAGTCGGTGGAGAATCGGAGGCTTCTTTGCGGAATTGACGGCCTCGTGCCGGTTCTTGTCGATCTTCTTGGCAATGTCGATGGCGATGTTTTGGTTGCGCAGACAGTACGGATGTTGCATTTGATTCGGAATGAGATTGAGGATAAGGAGAGGTTTGTGAAGATGATGTTGAAAAGCGATCGTAATTGTATTTCGTCTCTGCTTTTGATTCTGAGGAAAGAAACCGTCGAATTGAAAATCTGTTCGGTTAATCTGTTAGAGCATCTCGCAATTGACGCCGAGGCGAAGATTGCGATCGCGGAAACAGATGGATTGATGCAAGATTTGCTGAAATTAATGAACTCTGAGAACGATTCAGCCCTAATCGAATCGGTTCTATCGTGCCTAATTTCAATTTCAATGCCGAAACGGATTAAAATCAAATTAGTCCATCTCGGAGTGATTAAATCGGTAACGAAGCTTCTCTCGGAAGCAAACTCGAGTTCGAGCATTTCGATGACGGAGAAGGTTCTGAAAGTACTGGAAACGGCATCGACGGTGAGGGAAGGGAGGACGGAGATCGGAGAGGACTCCGCGTGCATAGCGGCAATAGTACAGAAGGTGTTGAAAGTATCGAACACAGCGACGGAGCACTCAGTGACAACGCTGTGGAGCATTTGCTATCTGTTCAGAGACGAGAAGGCAGCGGAAGCGCTGACGAAGGCGAACGGATTGACGAAGATTCTGCTGTTGATGCAGAGCAACTGCTCGGCGCCGGTCCGGCAGATGGCCAGAGATCTGCTGAAGATTTTCCGGATAACTTCCAAATCGTGCCTGTCGAGTTACGACACGAAAACTACGCATATCATGCCCTGTTGA 1239 48.35 MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLMNSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7531698 7532936 + Carg10548-RA Car03g00973 145025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00973 412 Pfam U-box domain 10 78 IPR003613 GO:0004842|GO:0016567
Car03g00973 412 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00973 Car07g00775 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00973 Car-Chr3:7531698 Car04g00082 Car-Chr4:435930 8.82E-41 dispersed
Car02g00441 Car-Chr2:3486625 Car03g00973 Car-Chr3:7531698 4.43E-135 wgd
Car20g00918 Car-Chr20:9974720 Car03g00973 Car-Chr3:7531698 1.73E-34 wgd
Car03g00973 Car-Chr3:7531698 Car07g00775 Car-Chr7:4053735 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00973 - - cmax:111478747 740.339