Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00988 ATGCCGGCTTGGTGGGTAAGAAAATCGAGTAAAAACAAGGACCATCACAATCATCCCACTACCTTTCTCAACTTCTTCAACTCTTCTCTTCTTCTTCTTCTTCTTCTTCCCCCAAAACTGAACCTAAGAACGCCAGCGACAAACCCAGGAGCTTCGATGAGGTCTCTCCGGTGTAGCAGGGATCTGGGCACTTCTGGTGCCGCCTCTTCTGGGTTTTCCGGTTTTGACTCCGATAGTGGAGATACCAGTGTTCCTCTTCCTCGACCTACTACTTCCGGCCTTGGGATTGATCATGGAGTCGGGAATGGATCTGGGTCTGTTTCGGTTTCAAGTGTTAGCTCCTCTGGCTCTTCCGATGATCATCCATCTGCTCAAGAACACCTTCAATTTGGAGGTCTCAGAGGATTTGCTGATACAAGAACAGAGAAAAGGCCAAGAAGTCCAGGTCCAGGATCAAGAGGACCCACCAGTCCTACATCGCCTCTCAACCCGCGGTTCTGTGGCATGAGTTTGGAGTCTCCTACAGGCAAGCTAGATGACGGGATGAGTCGATGTCACAAGCTGCCGCTACCTCCAAGTTCTCCCACCAGCCCGTCTTCCTTGACCAGCACGAGAGCTATCAATATCGGCGAGAACAACGTTGCTACACAACCGAAGTGGAAGAAAGGAAGGCTTCTAGGAAGGGGAACGTTTGGACATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATCAAGGAGGTCAGGGTTATAAGCGACGATTCGACATCGAAGGAATGTCTCAAGCAATTGAACCAGGAGATTACCGTGCTCAGTCAGCTGTCGCATCCAAACATCGTCCGGTACTATGGTAGTGAAATGGGTGACGAGTCCCTCTCGGTCTATTTAGAATACGTCTCTGGTGGCTCAATTCACAAGTTACTTCAGGAATACGGTGCCTTCAAAGAACCTGTCGTAAGAAACTATACCCGAAAGATCCTTTCCGGGCTTGCTTATCTGCACGGGAGAAACACAGTGCATAGGGACATAAAAGGGGCAAATATCTTAGTCGATCCGAACGGCCAGGTCAAGTTGGTGGACTTTGGCATGGCTAAACATATTACGAATTGTACTTCGATGCTCTCCTTCAAAGGTAGTCCTTATTGGATGGCCCCCGAGGTTGTAATGAATACAAATGGCTACAGTCTTGCTGTAGACATTTGGAGTTTAGGGTGTACGGTTCTTGAAATGGCAACGTCCAAACCGCCTTGGAGCAAATACGAAGGGGTGGCTGCCATTTTCAAAATTGGGAATAGTAAAGACATTCCAGAAATTCCCGACCATCTCTCGAACGATGCTAAAAGTTTCGTGCAATTATGCTTGCAACGGGACCCGGCTGCACGTCCTTCGGCTGCAGAACTACTGGATCACCCTTTTGTTCAAGATGCGGTAACACCAAGAGCGTCCGATGTTAACTTGTCCATGGATGCATTCCTGTTTAGTTTCGATGGAAGCCAGACTCCGCCATTGTTAGATCGGCATCCAAACCGAAAAAGTATAAGCATATGCGATGGTGATTATGCGACAAACCCAACAATCTCTTCGAGAACTTCGAGGAGTCCCAGGGGAAACGCAAGATTGATCACATCCTTGCCCGTCTCTCCTAGTTCAAGTCCATTACGGTCGTATGGCCCCGCACACCAGAGCTGTTATCTTTCACCACCACACACATCTTACATGGGGTTGGGGCAAAGTGGATACAATTTAAACGAATATGCATATAACACAAGACCGAACACATTGTTCACCCTCGATCCATCACGAGAGTCGTTACTATTGAAAGTTCGGACTCACGGCGGATCACCAATAAGACCTCTATGA 1869 48.05 MPAWWVRKSSKNKDHHNHPTTFLNFFNSSLLLLLLLPPKLNLRTPATNPGASMRSLRCSRDLGTSGAASSGFSGFDSDSGDTSVPLPRPTTSGLGIDHGVGNGSGSVSVSSVSSSGSSDDHPSAQEHLQFGGLRGFADTRTEKRPRSPGPGSRGPTSPTSPLNPRFCGMSLESPTGKLDDGMSRCHKLPLPPSSPTSPSSLTSTRAINIGENNVATQPKWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVRVISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYVSGGSIHKLLQEYGAFKEPVVRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGQVKLVDFGMAKHITNCTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDIPEIPDHLSNDAKSFVQLCLQRDPAARPSAAELLDHPFVQDAVTPRASDVNLSMDAFLFSFDGSQTPPLLDRHPNRKSISICDGDYATNPTISSRTSRSPRGNARLITSLPVSPSSSPLRSYGPAHQSCYLSPPHTSYMGLGQSGYNLNEYAYNTRPNTLFTLDPSRESLLLKVRTHGGSPIRPL 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7617163 7620817 + Carg10532-RA Car03g00988 145040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00988 622 MobiDBLite consensus disorder prediction 103 124 - -
Car03g00988 622 MobiDBLite consensus disorder prediction 67 182 - -
Car03g00988 622 Pfam Protein kinase domain 221 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00988 622 MobiDBLite consensus disorder prediction 67 89 - -
Car03g00988 622 ProSitePatterns Protein kinases ATP-binding region signature. 226 249 IPR017441 GO:0005524
Car03g00988 622 ProSiteProfiles Protein kinase domain profile. 220 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00988 Car07g00791 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00816 Car-Chr2:5902584 Car03g00988 Car-Chr3:7617163 6.94E-137 dispersed
Car03g00988 Car-Chr3:7617163 Car18g01166 Car-Chr18:11408514 6.67E-144 dispersed
Car17g00232 Car-Chr17:1433358 Car03g00988 Car-Chr3:7617163 2.07E-89 dispersed
Car03g00988 Car-Chr3:7617163 Car07g00791 Car-Chr7:4161278 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88739 PF00069 Pkinase 6.00E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00988 K04421 - csv:101203907 930.243