Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01062 ATGGAAATGCCTGGAAGGAGGTCAGATTACACGTTTTTAAGTCAAATTCCGGATGAGGAGATTGGAACGGGACCTTCCACCTCCTTTTTCGGGTCAATAGCAGCTGAGGCAAACATTAGCAAGGGGAGAACGGATAGAGTCTTTGATTGGGACGGGAGTGGTGATCACAAGTTAAACACGCAGCCGAATCGGATTGGGAACATGTATTCATGGATTGGTTTGCAGAGGCATTCTAGTGGAAGTAGCTACGATGATAGCTCTCTCTCCAGTGATTACTACGCACCAACGCTCTCAAACGCAGCAGCAAATGAGATAAATGCATTGGGATATATCCACGACGATGAATTTAGAGTCAAAGCTGTCGGAAGTGGAGGTTCGTCGGGGAAGAGCTGGGCACAGCAGACGGAAGAAAGTTATCAGTTGCAGCTGGCCTTGGCTCTCAGGCTTTCTTCAGAGGCCACTTGTGCCGATGATCCCAACTTTATGGATCTGATGCCAGACGAGGCAGCTTCAAGATCGTTGTCAAGTTCAGCTGAGGCTATCTCGCATCGATTTTGGGTAAATGGATGCATGTCATATTTTGAGAAGGTGCCAGATGGTTTGTACCTAATTCATGGGATGGACCCTTATGTATGGTCTTTATGCACCAATCTGAAAGAGGATGGGCGTATACCATCATTTGAATCTCTGAAGACAGTTGACTTCAGCATCCGTTCATCAATTGAAGTAGTTTTCATAGATCGGCATAGTGATGCTAGCCTAAAGGAACTGCAAAACAGGGTCCATAATATTTCTTCTAGCTGTATAACGACAGAAGAGGTTGCGGATCATTTAGCAAAGCTGGTATGCAATCATATGGGGGGTTCAGTTTCTGAGGGAGAAGATGCCTTAGTTCCCTCCTGGAGGGAATGCAGCGATGACTTAAAAGAATGTTTGGGATCTGTTGTGATTCCCTTGTGCAGCTTAGCTGTTGGCCTTTGCAGGCATCGTGCTCTTTTATTCAAAGTGCTAGCAGATTCAATTGATTTGCCTTGTCGAATTGCCAGGGGCTGTAAATATTGCACTAGAGATGATGCTTCATCTTGCCTTGTTAGGTTCGGTCTTGATAGGGAATATGTCATTGATCTGATTGGGAAGCCTGGTTGCTTATGTGAACCTGATTGTTTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCATTGCGATTTCCAAGACTAAAACCTATTGAATCTAACATTGATTTCAGGTCACTGGCCAAACAGTATTTCTTGGATAGTCAATCACTTAATATTGTATTTGATGAAGCTTCTTCAGGGAATGTTGTATCTGGGAAGGATGCTGCATGCTCTGTCTATCAAAGGCCATTCAACAGGAAGGATGTACATGGAAAAAACATAGTGCTTGCTGGTGACAGGGATAGAAGTCCTCAATTAATGAATCCAAAAGTTACTCAACGGAATGCTCAAGATGGAAAGTCTGAGCAATTTAGATCATGTGATTCTACTGCTCAACATAGTGTACAGTCTACCCCTTTTGTAGAAAATGTGGTTCGTTTAAACCAGATCTCACAGATTGATTCCAGAGATTCTGAGCCTCTCTTAGCACTGCCCTGTCTAAGGATGGATCCTGCTAATAATTTATCATTCATTGATGGTAATCGGCTGGTTAAAAAACCGAATCAGCTTTCCTTTGGCATAGAAGATTTTGTTATTCCATGGAATGATCTTGTTTTGAGGGAGAAAATTGGAGCAGGTTCTTTTGGGACAGTGTATCATGCTGATTGGCACGGCTCAGATGTTGCGGTGAAGATTCTGATGGAACAAGACCTTAATGCAGAACGGTTCGAGGAATTTCTTAGGGAGGTTCAATCACTTCTTTTGCTTTTCCAGGTTGCCATAATGAAATCTCTACGACATCCGAACATTGTTCTTTTTATGGGTGCAGTCACTGAGCCTCCAAACTTGTCCATTGTCACAGAATACTTATCAAGAGGGAGTTTGCACAGGCTTTTGCATAGACCTGGGGCACGAGAAGTCTTAGATGAAAGACGTCGGTTAAACATGGCACATGATGTTGCAAAAGGGATGAATTATCTTCACAAACGTAATCCCCCAATTGTTCATCGTGATTTGAAATCTCCAAATATTTTGGTTGATAAGAAGTACACAGTAAAGATTTGTGATTTTGGGCTTTCACGCTTGAAGGCGCACACATTTCTTTCATCAAAATCAGCTGCTGGGACCCCTGAATGGATGGCACCCGAAGTTCTCCGTGATGAGCCTTCAAATGAGAAATCAGATGTTTATAGCTTTGGTGTGATACTGTGGGAGCTTGCTTCACTGCAGCAACCATGGGGCAACTTGAACCCGGCGCAGGTTGTGGCCGCCGTGGGTTTCAAAGGCAAAAGGCTTGAGATCCCATGTGATTTAAATCCTCAAGTTGCTACTATTATAGAGGCTTGCTTCGCCAGCGAGCCCTGGAAACGTCCATCCTTTTATGAAATAATGGAATCATTGAAGCCATTGATCAAACCAGCTACACCTAATCAAGCTCGCCCAAACATGTCATTAGTTACTCAATGA 2586 43.5 MEMPGRRSDYTFLSQIPDEEIGTGPSTSFFGSIAAEANISKGRTDRVFDWDGSGDHKLNTQPNRIGNMYSWIGLQRHSSGSSYDDSSLSSDYYAPTLSNAAANEINALGYIHDDEFRVKAVGSGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFMDLMPDEAASRSLSSSAEAISHRFWVNGCMSYFEKVPDGLYLIHGMDPYVWSLCTNLKEDGRIPSFESLKTVDFSIRSSIEVVFIDRHSDASLKELQNRVHNISSSCITTEEVADHLAKLVCNHMGGSVSEGEDALVPSWRECSDDLKECLGSVVIPLCSLAVGLCRHRALLFKVLADSIDLPCRIARGCKYCTRDDASSCLVRFGLDREYVIDLIGKPGCLCEPDCLLNGPSSISISSPLRFPRLKPIESNIDFRSLAKQYFLDSQSLNIVFDEASSGNVVSGKDAACSVYQRPFNRKDVHGKNIVLAGDRDRSPQLMNPKVTQRNAQDGKSEQFRSCDSTAQHSVQSTPFVENVVRLNQISQIDSRDSEPLLALPCLRMDPANNLSFIDGNRLVKKPNQLSFGIEDFVIPWNDLVLREKIGAGSFGTVYHADWHGSDVAVKILMEQDLNAERFEEFLREVQSLLLLFQVAIMKSLRHPNIVLFMGAVTEPPNLSIVTEYLSRGSLHRLLHRPGAREVLDERRRLNMAHDVAKGMNYLHKRNPPIVHRDLKSPNILVDKKYTVKICDFGLSRLKAHTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELASLQQPWGNLNPAQVVAAVGFKGKRLEIPCDLNPQVATIIEACFASEPWKRPSFYEIMESLKPLIKPATPNQARPNMSLVTQ 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8641205 8649185 - Carg10461-RA Car03g01062 145114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01062 861 Pfam Protein tyrosine and serine/threonine kinase 578 840 IPR001245 GO:0004672|GO:0006468
Car03g01062 861 MobiDBLite consensus disorder prediction 473 495 - -
Car03g01062 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Car03g01062 861 Pfam Ethylene-responsive protein kinase Le-CTR1 178 384 - -
Car03g01062 861 ProSiteProfiles Protein kinase domain profile. 577 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01062 861 MobiDBLite consensus disorder prediction 479 495 - -
Car03g01062 861 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01062 Car06g00385 CCT
Car03g01062 Car14g00249 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01062 Car-Chr3:8641205 Car09g00527 Car-Chr9:2961597 0 dispersed
Car14g00249 Car-Chr14:1156062 Car03g01062 Car-Chr3:8641205 0 wgd
Car03g01062 Car-Chr3:8641205 Car06g00385 Car-Chr6:2099585 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88741 PF07714 PK_Tyr_Ser-Thr 1.10E-65 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01062 K14510 - csv:101208800 1459.51