Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car03g01068 | ACCGAGCTTTGTCGTTTCAGTGGCGCTAAGATATATCCCGGTAGAGGAATCAGATTTATCCGTGCTGATTCACAGGTTTTCCTGTTTGCGAACTCCAAATGTAAGAGGTACTTCCATAACAAATTGAAGCCTTCTAAGCTCACCTGGACAGCCATGTACAGGAAGCAACATAAGAAGGATATTGCTCAAGAGGCTGTGAAGAAGAGGAGACGTACCACCAAGAAGCCCTACTCAAGGTCCATAGTGGGTGCTACATTGGAGGTTATCCAGAAGAAGAGAGCTGAGAAGCCCGAGGTTCGTGATGCTGCTAGAGAAGCAGCCCTCCGTGAAATTAAGGAGAGAATTAAGAAAACTAAGGATGAAAAGAAGGCAAAGAAGGCAGAAGTGACGGCAAAAACACAGAAGACACAGAACAAGGCTAACGTTGGTAGGGGAGCTGCACCGAAGGGACCAAAGCTTGGTGGTGGCGGTGGCAAACGTTGA | 483 | 47.41 | TELCRFSGAKIYPGRGIRFIRADSQVFLFANSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTAKTQKTQNKANVGRGAAPKGPKLGGGGGKR | 160 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 8687817 | 8689413 | - | Carg10455-RA | Car03g01068 | 145120 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car03g01068 | 160 | MobiDBLite | consensus disorder prediction | 58 | 79 | - | - | |
| Car03g01068 | 160 | Coils | Coil | 108 | 135 | - | - | |
| Car03g01068 | 160 | MobiDBLite | consensus disorder prediction | 115 | 132 | - | - | |
| Car03g01068 | 160 | Pfam | Ribosomal protein L24e | 1 | 63 | IPR000988 | - | |
| Car03g01068 | 160 | ProSitePatterns | Ribosomal protein L24e signature. | 6 | 23 | IPR023442 | - | |
| Car03g01068 | 160 | MobiDBLite | consensus disorder prediction | 115 | 160 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car03g01068 | Car14g00234 | CCT | |
| Car03g01068 | Car06g00369 | CCT | |
| Car03g01068 | Car06g00369 | ECH | |
| Car03g01068 | Car14g00234 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car03g01068 | Car-Chr3:8687817 | Car09g00141 | Car-Chr9:681624 | 3.88E-19 | dispersed | |
| Car14g00234 | Car-Chr14:1097428 | Car03g01068 | Car-Chr3:8687817 | 9.06E-86 | wgd | |
| Car03g01068 | Car-Chr3:8687817 | Car06g00369 | Car-Chr6:2032972 | 6.26E-86 | wgd | |
| Car03g01068 | Car-Chr3:8687817 | Car07g00854 | Car-Chr7:4527553 | 2.63E-109 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car03g01068 | K02896 | - | csv:101206866 | 231.106 |