Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01071 ATGAAGTTGCCGCTTTTTATGATTCCTCTGATTGCTGCTTGTCTTTTTGTCATTTTGGGTCCGCCGTTCTTGTCGGACTGGCACACTTTCCTTGATCGATATGCTTCATTCCGGAGCTCTCTTTCTTCTTCCTCCTCAGAAATGAATTCTCATTCAAATGCCACGGCGGCGATACCGGTGCCGGTGACGGTGGATGGTCAAACAGTGGAACAACAACAACAAAAACGCCAACCTCTGTTTAACCACTCTGTTTCAAATCACTCTGTTCATGCTTCTTCTTCTTCTTCTCCACCGCCACCACCGATCGACGAAATGCAGATTCTTCCACCGGTCTTTAATAGGACGAGAGTCAACGAAGAGTTGCTAGAAACCGCCATAAATGAAGTGATCAAGAACGCTTCTGCTGAAAGTAATTATGAAACGGCGGCGAAAGCTAGAAAACAGAGGAGATATACAAAATTGGAGAGAATCGAAGCGGGGCTAAGAGGAGCAAGAGCCGCCATTAGAGAAGCCAGGTTCCAAAACCAAACACAAGATTCCGACTTCGTTCCTTCTGGACCAATGTATTGGAATGCCAAAACTTTTCACAGGAGTTACCAAGAAATGGAGAAGGAGCTGAAGATCTTTGTGTACGAAGAAGGAGAGCCTCCCCTGTTTCACAACGGCCCCTGCAAGAACATTTACTCAACGGAAGGGAATTTCATCCATGCCATCGAGATGGACTCCCGATTTCGAACCAACGACCCCAACAAAGCCCATGTCTTCTTCCTTCCTCTGAGTGTTGTCATGCTCGTTCGATTCGTCTACGTTCACGACTCCCATGACTTCACTCCACTACGACGCACCGTCGCTGATTATGTCAATGTCATCGGAACCAAATATCCATTCTGGAACCGCACCCTCGGCGCTGATCATTTCATGCTCTCCTGCCACGATTGGGGTCCGGAAGTATCAAAATCAGAACCCCATTTGTACAAGAACTCCATTCGGGTACTGTGCAACGCCAACACATCCGAAGGCTTCAACCCATCAAAGGACGTATCACTCCCGGAAATCAATCTGCAGACGGGTGTGTTGACAGGATTTCTAGGTGGCCCATCTCCCTCCCGCCGCCCAATTCTGGGTTTCTTCGCCGGCGGACTTCACGGCCCAATAAGGCCCATTCTAATCCAGCAATGGGAGAACAAGGACCAGGATATTCGAGTCCACCAGTACCTCCCGGAAGGGGTCTCTTACATTGAGATGATGAGGAAGAGCAGGTTCTGCCTCTGCCCCAGCGGCTACGAAGTCGCCAGTCCCAGAATCGTGGAGGCCATTTACACCGGCTGCGTTCCGGTCCTCATTTCCGATCACTACGTCCCGCCGTTCAGCGACGTCCTCAATTGGAAATCTTTCTCCGTCGAAGTCTCGGTCAACGACATTCCGAACTTGAAGAAGATCCTGGCCGGAATATCGACGCGGCAGTACCTGAGAATGTACCGGAGAGTGGTCAACGTTAGAAGACACTTCGTAGTCAACTTTCCGCCGAAGAGATTCGATGTTTACCATATGATCCTTCATTCTGTGTGGCTTAGAAGACTCAATCTTGGACTACGGGATCATTGA 1605 49.35 MKLPLFMIPLIAACLFVILGPPFLSDWHTFLDRYASFRSSLSSSSSEMNSHSNATAAIPVPVTVDGQTVEQQQQKRQPLFNHSVSNHSVHASSSSSPPPPPIDEMQILPPVFNRTRVNEELLETAINEVIKNASAESNYETAAKARKQRRYTKLERIEAGLRGARAAIREARFQNQTQDSDFVPSGPMYWNAKTFHRSYQEMEKELKIFVYEEGEPPLFHNGPCKNIYSTEGNFIHAIEMDSRFRTNDPNKAHVFFLPLSVVMLVRFVYVHDSHDFTPLRRTVADYVNVIGTKYPFWNRTLGADHFMLSCHDWGPEVSKSEPHLYKNSIRVLCNANTSEGFNPSKDVSLPEINLQTGVLTGFLGGPSPSRRPILGFFAGGLHGPIRPILIQQWENKDQDIRVHQYLPEGVSYIEMMRKSRFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVNDIPNLKKILAGISTRQYLRMYRRVVNVRRHFVVNFPPKRFDVYHMILHSVWLRRLNLGLRDH 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8697903 8699849 - Carg10452-RA Car03g01071 145123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01071 534 Pfam Exostosin family 203 482 IPR040911 -
Car03g01071 534 MobiDBLite consensus disorder prediction 84 106 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01071 Car-Chr3:8697903 Car09g01107 Car-Chr9:11245861 0 dispersed
Car20g00458 Car-Chr20:2557002 Car03g01071 Car-Chr3:8697903 4.31E-31 wgd
Car03g01071 Car-Chr3:8697903 Car07g00852 Car-Chr7:4518689 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01071 - - cpep:111804140 983.015