Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01073 ATGGAATCCATTCTTCTCACCGCCACCACTTCAAACCTCCCGCTGCCTCGAAACTCTTCCCTTTCCCCACTCTCTTTCTCCTCCTCCCTCCCGAATCAGGTGAGCACCAAGGTCGACATCAGGCGAACCAACAAGGGTACGACCAAGGCCCCGCGCATCGTGGCCTCCTCCTCGGGGTCCAAAGGAAGGGCGGGCAAAGGGGTGTCTGCCAATGTAGCAGTGGACGGTTCGGTTGCGGCGGTTGCGGCGGAGGGGGTGAAGGACGTGTCGTGGAAGGAATTACAGTACGAGGAAGGGTCAACTGGGCACAGGCAGCCCCTTCCCACTAACCCGGATACTGAGAAGCAGATGGAATATATTACAAAAATATTGGGCTCAAATGTGTACGATGTGGCTATTGAAACCCCATTGCAGCTTGCTCCCCTCTTGTCTACTCAATTGGGTGTCAACCTCTGGCTCAAGAGGGAGGATTCACAGCAGGTGTTCTCATTCAAGATTCGAGGTGCTTACAATATGATTTCCCAACTTCCTGAAGAACAATTGAAAAAGGGGATTATCTGTGCATCAGCTGGGAATCATGCCCAGGGAGTTGCATTATCTGGGCAGCGATTAAAAACTAAAGCCCACATTGTTATGCCAACAACTACTCCTCAAATCAAGATAGATGCAGTTGAGAGATTGGGTGGAATTGTTGATCTGAAAGGCAATACTTTTGATGAAGCGCAAAAAATAGCTAAGGAGAGGAGCGAAAAGGAAGGCCTCACATTCATACCTCCTTTTGATGACAAAGATGTTATAGCAGGGCAAGGTACAGTCGGTATGGAAATTGGGCGTCAAATAAGGGGCAAAATCCATGCTATTTTTGTTCCTATTGGTGGTGGTGGTCTCGCTTCTGGGATTGTCTCTTTTTACAAGCTGGTTTATCCTGATGTAAAGGTATTTGGGGTGGAACCAAACGATCAGAACTCCATGGCGCAGGCATTGTATCGTGGGGAGATAGTGAATGTGACAGATATTGGGCATTTTGCAGATGGAGTAGCTGTTCAACAAGTAGGCGAAGAGACATTTCGAATCTGCTATGAACTCCTGGATGATGTCATTCTTGTTAAAAAGGAATCAATATCTGCGGCTATAAAGGACATGTTTAACGACGGCAGGAACATCTTAGAACCTTCCGGTGCTCTTTCCATTGCTGCAGCCAAGGCCTACTGCGAGTATAACAACATTAAGGGAGTAAATGTTGTGGCTGTTACCAGTGGTGCAAATATGAACTTTGACCAACTGGGACAAATCTCTGATCTTGCCAATATTGATCAGTCTATTCTCGCAACTATGTTGCCAGAAACACCTGGAAGCTTAAAACAACTTACCGACCTGATCGCCGATTTGGGTGTCACCATTACAGAAATGACTTATAGATTTAGCTCTGGCTCAACAGATGCTCTTGTTGTTTATAAAGTTAAAGCAGTAGATTCAGCACTTGAAACTTTGGTGAGACAGTTGAACTTTTTCGGGTTCAAAACTTACACTTTATCCGATAATGAAGTTGTTAGGAACCATCTCCGTTACATGATGGGAGGCAGACAAAACGTTGAAAACGAAACTCTCTTCCGTTTTACTTTCCCAGAAAAGGTTGGTGCTCTAAAGCACTTCCTCAAAGACTTTCAGCCAAACTGGAACGTTTCTTTGTTCCACCATCGTCACCAGGGTATTCTTACTTCAGATGTGTTGATTGGAGTCCAACTTGAGAAATCAGAGGAGAAAAAGTTTCATGAGTATGCAAAGAGGGTTGGATATCAATATGAGGTAATATCTCAAGATGATTCAGCCCACGTATTCTCATTCAAGATTCGAGGAGCGTATAATATGATTTCCCAACTCCCCAAAGAAAAATTGAAAAAGGGGGTTATCTGTGCGTCCGCTGGGAATCATGCCCAGGGAGTTGCATTAGCTGGTCAGCGATTGAAAACTGAAGCCCACATTGTTATGCCAACAACTACTCCTCAAATTAAGATAGATGCAGTTGAGGACTTGGGTGGAATTGTCGATCTGTTTGGCAATGATTTTAATCAAGCGCAAGAAAGAGCTGAAGAGCGGAGCAAAGAGGAAGACCTCACAATCATACCTCCTTTTGATGACGAAGATGTTATAGCAGGCCAAGGTACAATTGGGATGGAAATTGGGCGTCAAATACGGGGCAAAATCCATGCTATTTTTGTTCCTGTTGGGGGTGGTGGCCTCGCTGCTGGTATTGTCTCTTTTTACAAGCTGGTTTATCCTGATGTAAAGGTATATGGGGTGGAACCAAATGATCAGAACTCCATGGCGCTGGCATTGCATCTTGGGAAGGTAGTATTTGTGGGCGATATTGGAAATTTTGCAGATGGAGTAGCTGTTAGACAAGTGGGGAACGAGACTTTTCGAATCTGCAATGAACTCCTGGATGGTGTAATTCTTGTTAAAAAAGAATCAATAGCTTCCGCTTTGAAGGACATGTTTAACGACGGCAGGAACATCTTAGAACCTTCCGGTGCTCTTTCCATTGCTGGAGCCGTGGCCTACTGCAGGCGTTATGGTATTAGGAGAGAAAATGTTGTGGCTGTTACTAGTGGTGCAAATATGAACTTTGACCAATTGGGTCATATTGCCGATCTTGCCAATTCTGATCAGTCTATTTTGGCAAGTTGGTTGTCAGAGTGCCCAAACAGCTTAGAACCACTTACCCGCGTGGTCGACCGAGTGGGAGGCAGACAAAACGTTGAAAACGAAACTCTCTTCCGTTTTACTTTCCCAGAAAAGGCAGGTGCTCTCAACCACTTCCTCAAAGGCTTCCAGCCCAACTGGAACATTTCTCTGTTGCACCATCGCGATCAGGGTATTATTACTTCACAAGTGTTAATTGGAATCCAACTTGAGAAATCAGAGGAGAAAAAGTTCGATGAGTATGCGAAGGAAGTTGGGTATCAATATGAGGCAATATCTCCAGATGATTCTGCCCATGTGCAGTGCCCTGCTGCTGCTGCTGCAACAGCTTCCTTTTGTGCTGCGCCAGTCGCTTGCAGAATGAACGTACTTCTTAACGCGCCCACATCGCACCCACTCTCTCGAAAATGGTCCCTTTTATCCCCAGCATTCTTATTGAATGGGACATCTATTCCGATCGATGACAATCGAAACAGAATTAGAGTTAACAGGGTGCCATTCATCCAAGCCACGCTTTCAAAACACACGGTTGAGAACCTTCCCAATTCTGTGTCGAACACTGCGGTTGTGGCTCTTGAAGACGCATTGGTGGCCGCCCCTTTGCCTCCTCGCAAAAGGGTGTTGGCGGATTCGCTGCAATTCCCGCCTGGGTATCTCGGCGCCGTTCCGAACCGTTTGGGGTCTGATGATGAAGAGGATAGTCTCGATGCGATGGAGTATTTGACTAGAATTTTGGGTTCGAAGGTGTATGATGTGGCTATTGAATCCCCGTTGCAGCTTGCGCCCATGTTGTCTGAGCGTTTGGGGGTCAATATCTGGCTCAAGAGGGAGGACTTGCAACCCGTGTTCTCATTCAAGCTCCGAGGAGCTTATAATATGATGGCCAAACTTCCAAAAGAACAGTTGGAAAGAGGAGTTATATGCTCATCAGCTGGAAATCATGCTCAAGGGGTTGCATTAGCTGCTAGGCGATTAAGATGCGATGCTGTGATTGCTATGCCCGTTACTACACCTGAAATTAAGTGGCAATCAGTTCAAAAATTGGGTGCAACTGTTGTTCTTGTTGGAGATTCATACGACGAGGCGCAAGCGTATGCTAAAAAGCGGAGCGTAGACGAAGGCCGCACATTCATACCTCCTTTTGATCACCCTGATGTTATAGCAGGACAGGGTACAGTTGGGATGGAAATTGTGCGCCAAATGAAGAGCAAATTGCACGCTATTTTCGTGCCTGTTGGGGGTGGTGGTCTAATAGCTGGTATTGCTGCTTATGTCAAGAGGGTTTCTCCTGAGGTAAAGATTATTGGGGTGGAGCCGTCTGATGCAAATGCTATGGCATTATCATTATGTCATGGTCAAAGAATAATATTAGAAAAGGCTGGAGGTTTTGCTGATGGTGTAGCAGTTAAGGAAGTGGGTGAAGAGACTTTTCGCCTTTGCAAAGGTCTCATGGATGGCGTAGTTCTTGTTGGCCGTGATGCTATATGTGCCTCCATAAAGGATATGTTTGAGGAGAAGAGAAGCATTTTGGAACCTGCAGGCGCTCTGTCTCTTGCTGGAGCAGAGGCATACTGCAAATATTATGGGTTGAAGGGAGAAAACGTGGTGGTAATAACAAGTGGTGCAAATATGAACTTTGACAAACTGAGAATAGTTACTGAGCTTGCCAATGTTGGTCGTGAACAAGAGGCTGTGCTCGTGACTAAATTGCCGGAGAAACCTGGAAGCTTTAAAAGATTCTGTGAACTGATTGGGGCTATGAACATTACAGAGTTCAAGTACAGATATAATTCTGAAGAAGAAGCGGTTGTTCTTTATAGTGTTGGTATGCATATGCCTTCAGAACTGGAAGAAATGATGAACCGGATGATTTCTTCTCAGCTTGAAACTTATAATCTCACAAATAATGATCTTGTAAAGGATCACCTGCGTTACTTGATGGGAGGCAGATCAAATGTTGAAAACGAGGTTCTTTGTCGTTTTATCTTCCCAGAAAGGCCAGGTGCTCTAGAGAAGTTCTTGGATGCTTTTAGCCCTCGCTGGAACATCAGTTTGTTTCACTACCATGGGCAGGGCGAAACAGGTGCAAATATATTCGTTGGGCTTCAGATTGAGAAACCCGAGATGGGCGAATTCCATGAACGTGCTAGGAGGGTCGGGTACGATTACGTTGTCGTAACTGATGATGGTATCTTTCAACTTCTAATGCATCATAGACCAACCCACAAGCCTCTAAATTGA 4944 45.43 MESILLTATTSNLPLPRNSSLSPLSFSSSLPNQVSTKVDIRRTNKGTTKAPRIVASSSGSKGRAGKGVSANVAVDGSVAAVAAEGVKDVSWKELQYEEGSTGHRQPLPTNPDTEKQMEYITKILGSNVYDVAIETPLQLAPLLSTQLGVNLWLKREDSQQVFSFKIRGAYNMISQLPEEQLKKGIICASAGNHAQGVALSGQRLKTKAHIVMPTTTPQIKIDAVERLGGIVDLKGNTFDEAQKIAKERSEKEGLTFIPPFDDKDVIAGQGTVGMEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEIVNVTDIGHFADGVAVQQVGEETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSGALSIAAAKAYCEYNNIKGVNVVAVTSGANMNFDQLGQISDLANIDQSILATMLPETPGSLKQLTDLIADLGVTITEMTYRFSSGSTDALVVYKVKAVDSALETLVRQLNFFGFKTYTLSDNEVVRNHLRYMMGGRQNVENETLFRFTFPEKVGALKHFLKDFQPNWNVSLFHHRHQGILTSDVLIGVQLEKSEEKKFHEYAKRVGYQYEVISQDDSAHVFSFKIRGAYNMISQLPKEKLKKGVICASAGNHAQGVALAGQRLKTEAHIVMPTTTPQIKIDAVEDLGGIVDLFGNDFNQAQERAEERSKEEDLTIIPPFDDEDVIAGQGTIGMEIGRQIRGKIHAIFVPVGGGGLAAGIVSFYKLVYPDVKVYGVEPNDQNSMALALHLGKVVFVGDIGNFADGVAVRQVGNETFRICNELLDGVILVKKESIASALKDMFNDGRNILEPSGALSIAGAVAYCRRYGIRRENVVAVTSGANMNFDQLGHIADLANSDQSILASWLSECPNSLEPLTRVVDRVGGRQNVENETLFRFTFPEKAGALNHFLKGFQPNWNISLLHHRDQGIITSQVLIGIQLEKSEEKKFDEYAKEVGYQYEAISPDDSAHVQCPAAAAATASFCAAPVACRMNVLLNAPTSHPLSRKWSLLSPAFLLNGTSIPIDDNRNRIRVNRVPFIQATLSKHTVENLPNSVSNTAVVALEDALVAAPLPPRKRVLADSLQFPPGYLGAVPNRLGSDDEEDSLDAMEYLTRILGSKVYDVAIESPLQLAPMLSERLGVNIWLKREDLQPVFSFKLRGAYNMMAKLPKEQLERGVICSSAGNHAQGVALAARRLRCDAVIAMPVTTPEIKWQSVQKLGATVVLVGDSYDEAQAYAKKRSVDEGRTFIPPFDHPDVIAGQGTVGMEIVRQMKSKLHAIFVPVGGGGLIAGIAAYVKRVSPEVKIIGVEPSDANAMALSLCHGQRIILEKAGGFADGVAVKEVGEETFRLCKGLMDGVVLVGRDAICASIKDMFEEKRSILEPAGALSLAGAEAYCKYYGLKGENVVVITSGANMNFDKLRIVTELANVGREQEAVLVTKLPEKPGSFKRFCELIGAMNITEFKYRYNSEEEAVVLYSVGMHMPSELEEMMNRMISSQLETYNLTNNDLVKDHLRYLMGGRSNVENEVLCRFIFPERPGALEKFLDAFSPRWNISLFHYHGQGETGANIFVGLQIEKPEMGEFHERARRVGYDYVVVTDDGIFQLLMHHRPTHKPLN 1647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8704845 8720651 - Carg10450-RA Car03g01073 145125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01073 1647 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 1178 1191 IPR000634 GO:0006520|GO:0030170
Car03g01073 1647 ProSiteProfiles ACT-like domain profile. 535 606 IPR001721 -
Car03g01073 1647 Pfam Pyridoxal-phosphate dependent enzyme 1154 1442 IPR001926 -
Car03g01073 1647 Pfam Pyridoxal-phosphate dependent enzyme 131 420 IPR001926 -
Car03g01073 1647 Pfam Pyridoxal-phosphate dependent enzyme 604 871 IPR001926 -
Car03g01073 1647 ProSiteProfiles ACT-like domain profile. 924 995 IPR001721 -
Car03g01073 1647 ProSiteProfiles ACT-like domain profile. 440 513 IPR001721 -
Car03g01073 1647 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 607 620 IPR000634 GO:0006520|GO:0030170
Car03g01073 1647 MobiDBLite consensus disorder prediction 44 67 - -
Car03g01073 1647 ProSiteProfiles ACT-like domain profile. 1465 1536 IPR001721 -
Car03g01073 1647 ProSiteProfiles ACT-like domain profile. 1558 1629 IPR001721 -
Car03g01073 1647 Pfam C-terminal regulatory domain of Threonine dehydratase 1550 1635 IPR001721 -
Car03g01073 1647 Pfam C-terminal regulatory domain of Threonine dehydratase 1455 1544 IPR001721 -
Car03g01073 1647 Pfam C-terminal regulatory domain of Threonine dehydratase 529 611 IPR001721 -
Car03g01073 1647 Pfam C-terminal regulatory domain of Threonine dehydratase 916 999 IPR001721 -
Car03g01073 1647 Pfam C-terminal regulatory domain of Threonine dehydratase 438 521 IPR001721 -
Car03g01073 1647 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 156 169 IPR000634 GO:0006520|GO:0030170
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01073 Car07g00872 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01073 Car-Chr3:8704845 Car02g01229 Car-Chr2:8315583 3.49E-29 dispersed
Car03g01073 Car-Chr3:8704845 Car07g00872 Car-Chr7:4679275 1.38E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01073 K01754 - csv:101205909 1055.05