Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01110 ATGGAGATGGGATCAGTCACAGTAAGATTCGAAGAGGAAGAGCTTGAAAATGGTGAATCAGAGAGGAGGAGAAAGAGAGGGAGAAGGAAGGATGCGGAGGATGGAATGGTATTAGATCCAAGACTGCCCATATTGAACGCATGGAACAGGATTTTTCTGGTGGCTTGTCTGGTTTCACTATTTGTGGACCCTCTCTTCTTCTTCCTGCCCCTTGTCAACACCGAGGACGTCTGCGTCGAAACCAGCCGAGGGCTCGCCGTGGCGCTGACCGTGGTTCGATCCATGGCGGATGTGTTCTACATAACCCACATAGTGGTGAGGTTTAGGACTGCTTATGTAGCTCCCTCCTCCAGGATCTTTGGAAGAGGGGAGCTCTACCTGTTGAGGCTGTATCTCATCTTCCCTCTATCTGAACAGATCATTAAGGCCACTGGAGCTCTGATGAAAACGGCATGGGCTGGAGCTGTCTATAACCTAATGCTGTTCATGCTTGCAAGCCACGTTTTGGGGTCGTGTTGGTACCTTTTATCCATAGGACGACAAATGGAATGCTGGAAAAAGGTTTGCAGCTTGGGGGAGGTGGATTGCGGATATGGGTTCTTTAGTTGTAAGGCTGGCGTGGGAGATCCAAGCAGAGGTGCTTGGTTTGAAGCAACCAATGTTTCAAATCTTTGTCATCCAAGTGCCACCACTTTCTTCCATTTTGGCATCTTTTCTGATTCTTTTGCATCAACTTCTTCCTCCTTTTTCAGTAGGTACTTCTACTGTTTTTGGTGGGGGCTCAGGAATTTAAGCTCTCTAGGACAAAATTTGCTAACAAGTAGCAATGTGGGAGAGATTAATTTCGCCATTGTGATTGCGATTGTGGGCTTGGTTCTTTTCGCTCTTCTTATTGGAAATATGCAAACTTACCTCCAATCGACGACATTGAGGCTAGAAGAGTGGAGGGTGCGGCGGAGAGACACAGAGCAATGGATGCAGCACAGGCAGCTGCCATACGAACTGAAGCAAAGCGTGAGAAAATACGAGCAATTCAGATGGATGGCAACTCATGGG 1056 47.73 MEMGSVTVRFEEEELENGESERRRKRGRRKDAEDGMVLDPRLPILNAWNRIFLVACLVSLFVDPLFFFLPLVNTEDVCVETSRGLAVALTVVRSMADVFYITHIVVRFRTAYVAPSSRIFGRGELYLLRLYLIFPLSEQIIKATGALMKTAWAGAVYNLMLFMLASHVLGSCWYLLSIGRQMECWKKVCSLGEVDCGYGFFSCKAGVGDPSRGAWFEATNVSNLCHPSATTFFHFGIFSDSFASTSSSFFSRYFYCFWWGLRNLSSLGQNLLTSSNVGEINFAIVIAIVGLVLFALLIGNMQTYLQSTTLRLEEWRVRRRDTEQWMQHRQLPYELKQSVRKYEQFRWMATHG 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8957918 8959636 + Carg10413-RA Car03g01110 145162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01110 352 Pfam Ion transport protein 127 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car03g01110 352 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01110 Car-Chr3:8957918 Car02g00648 Car-Chr2:4882037 6.36E-124 dispersed
Car20g00437 Car-Chr20:2459197 Car03g01110 Car-Chr3:8957918 3.96E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01110 K05391 - csv:101221856 443.351