Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car03g01114 | ATGTCTAAGGATCTCGAAGCCGGTGGGTTCGCTACCAAGGACTACCAAGACCCACCACCAGCACCATTGATCGACGCCGACGAGTTCACTCAATGGTCTTTTTACAGAGCCATCATCGCCGAGTTCGTCGCCACGCTTTTGTTCTTGTACGTCACTGTTCTCACTGTCATTGGCTACAGTAACCAGTCCGACATCAAAAACGGCGGCCAAATCTGCGGCGGGGTCGGTATTCTTGGCATTGCTTGGGCATTCGGCGGCATGATTTTCGTCCTCGTTTACTGTACCGCTGGAATTTCCGGAGGCCACATTAACCCGGCGGTGACTTTTGGGTTGTTTTTGGCTCGGAAAGTGTCTTTGGTTAGAGCAATTCTTTACATGGCGGCTCAATGTTTGGGCGCCATTTGTGGGTGTGCTTTAGTGAAATCGTTCCAGAAGGCTCATTACAATGAGTACGGCGGTGGAGCCAATTCACTCGCCGATGGGTACAGCACCGGCACCGGCTTAGCCGCAGAGATCATCGGAACTTTCGTTCTTGTTTACACCGTCTTCTCCGCCACCGATCCCAAACGGAATGCCAGAGATTCTCACGTTCCTGTTTTGGCGCCACTCCCAATTGGGTTCGCGGTGTTTATGGTTCATTTGGCCACCATTCCAATCACCGGCACCGGCATCAACCCAGCTCGAAGCTTTGGAGCCGCCGTGATCTTTAACAAAGACAAGCCATGGGATGACCAGTGGATCTTTTGGGTTGGCCCCTTCATTGGAGCTGCCATTGCTGCAATTTATCACCAAATCATACTGAGAGCAGGGGCAGTTAAAGCTCTGGGATCGTTCAGAAGTTCCACCTCCGTTTAA | 855 | 51.81 | MSKDLEAGGFATKDYQDPPPAPLIDADEFTQWSFYRAIIAEFVATLLFLYVTVLTVIGYSNQSDIKNGGQICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYMAAQCLGAICGCALVKSFQKAHYNEYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKDKPWDDQWIFWVGPFIGAAIAAIYHQIILRAGAVKALGSFRSSTSV | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9045777 | 9047124 | - | Carg15272-RA | Car03g01114 | 145166 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car03g01114 | 284 | CDD | MIP | 36 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 8 | 281 | IPR034294 | - | |
Car03g01114 | 284 | Gene3D | Glycerol uptake facilitator protein. | 21 | 284 | IPR023271 | - | |
Car03g01114 | 284 | PANTHER | AQUAPORIN PIP2-4-RELATED | 8 | 281 | - | - | |
Car03g01114 | 284 | SUPERFAMILY | Aquaporin-like | 28 | 268 | IPR023271 | - | |
Car03g01114 | 284 | Pfam | Major intrinsic protein | 29 | 263 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | PRINTS | Major intrinsic protein family signature | 36 | 55 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | PRINTS | Major intrinsic protein family signature | 84 | 108 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | PRINTS | Major intrinsic protein family signature | 121 | 140 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | PRINTS | Major intrinsic protein family signature | 170 | 188 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | PRINTS | Major intrinsic protein family signature | 206 | 228 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | PRINTS | Major intrinsic protein family signature | 246 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | TIGRFAM | MIP: MIP family channel proteins | 40 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car03g01114 | 284 | ProSitePatterns | MIP family signature. | 102 | 110 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car03g01114 | Car-Chr3:9045777 | Car04g02491 | Car-Chr4:19784872 | 6.16E-169 | dispersed | |
Car18g00101 | Car-Chr18:544821 | Car03g01114 | Car-Chr3:9045777 | 5.69E-32 | dispersed | |
Car03g01114 | Car-Chr3:9045777 | Car04g01446 | Car-Chr4:8395801 | 4.25E-170 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car03g01114 | K09872 | - | csv:101215366 | 538.88 |