Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01126 ATGAAAAGATGTTCTTTTGAGTGTCTGATATTATTGCACCTGTCTGTGCAGAATTCTAAGGAGTCAAAGAAGAAATGGTTTGGAAAGCAAAAGCATCCCAATTCAGATTCTACAGAGGCTGTGACAGTGCCATCACCACCTCAGCTAGCAGAGGCGAATATCATCCATTTAGAGAGTGTAGAAAACAACGAGCCTTGCTACGATGAAGTTGCTTCTTCAGCTACTCAGGCTTATGAGGCTAGTGTTTCTACTACTATTGAGCCAAATGTTGCTACTCCTTTTGCTGCAGCCGAAGTTGTGCAACTCTCTACACAAACTCATATTTCCAGCCCACCTAAGGAGGAAGTTGCAGCAATCAAGATCCAAACCGTATTCCGTGGATACCTGGCAAGAAGGGCGTTACGAGCATTACGAGGACTGGTGAGGCTGAAATCACTGATGGAGAGTTCTACTGTGAAACGCCAAGCGTCGAATACCCTTCGTTGCATGCAGACTCTTGCTCGCGTTCAATCTCAGATCCAGTTTAGGAGAGTTAGAATGTTGGAGGAGAATCAGGCTCTCCAGAAACAACTACTTCAAAAACATGCTAAAGATCTTGAAAGCTTGCGGATTGGAGAGGAATGGGATGACAGCTTACAATCAAAGGAGCAGATTGAAGCTGGTCTACTGAGCAAATATGAGGCTGCAACGAGAAGGGAGAGAGCCCTGGCATATGCCTTCACTCATCAGCAAACCTGGAAGAATTCTGCAAGATCTGTAAATCCAGCATTCATGGATCCAACTAATCCCACCTGGGGTTGGAGCTGGTTGGAACGATGGAGCGGGGCTCGGGTGCATGATGCTCCTGACCTGACAAGAAAAGAGTTGAATAACAGTCGCTCCGGTACGAAGACGACAAGTCGTGGCAATGTTGGCGGAGAAATCAGCAAATCATTTGCCCGCTTTCAGTTGAACTCAGAGATGGATTCCCCAACTGGCAGTCATAAGACAACTCACTCTGCTTTCAAGCCTTCCACAACTCCTTCCAAGCCAGCTTCATCTTGTGCATCAAGAAAACTGAAGCCTCCAAGCCCAAGAATCCTCTCCATTCATGACGACGACTCGAAAAGTACTGTCAGTGTGCAGTCTGAAAGATTAAGAAGGCATAGCACAGGAGGAGGATCATCGGTTAGGGACGATGATAACATGTCGATCACGAGCGCTGTTCGGAGTTACATGACACCTACTGAATCTGCAAAAGCAAAATCCAGATTGCAGAGTCCAATGGGAGTAGAGAAGAACGTAACAACTCCAGAGAAAGGGTCTTCAGCAACAGCAAAGAAACGGCTATCTTACCCTCCTTCACCAGCCAGGCCAAGGCGACATTCCGGTCCGCCTAAGATCGAAGGTGACCCGGATGCAGGAAAGAGCCTTAGCAATGGAGTTGGTGGCTAA 1434 47.14 MKRCSFECLILLHLSVQNSKESKKKWFGKQKHPNSDSTEAVTVPSPPQLAEANIIHLESVENNEPCYDEVASSATQAYEASVSTTIEPNVATPFAAAEVVQLSTQTHISSPPKEEVAAIKIQTVFRGYLARRALRALRGLVRLKSLMESSTVKRQASNTLRCMQTLARVQSQIQFRRVRMLEENQALQKQLLQKHAKDLESLRIGEEWDDSLQSKEQIEAGLLSKYEAATRRERALAYAFTHQQTWKNSARSVNPAFMDPTNPTWGWSWLERWSGARVHDAPDLTRKELNNSRSGTKTTSRGNVGGEISKSFARFQLNSEMDSPTGSHKTTHSAFKPSTTPSKPASSCASRKLKPPSPRILSIHDDDSKSTVSVQSERLRRHSTGGGSSVRDDDNMSITSAVRSYMTPTESAKAKSRLQSPMGVEKNVTTPEKGSSATAKKRLSYPPSPARPRRHSGPPKIEGDPDAGKSLSNGVGG 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9095471 9097871 + Carg15284-RA Car03g01126 145178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01126 477 MobiDBLite consensus disorder prediction 288 347 - -
Car03g01126 477 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Car03g01126 477 MobiDBLite consensus disorder prediction 284 477 - -
Car03g01126 477 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Car03g01126 477 MobiDBLite consensus disorder prediction 358 376 - -
Car03g01126 477 MobiDBLite consensus disorder prediction 377 437 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01126 Car06g00308 CCT
Car03g01126 Car06g00308 ECH
Car03g01126 Car07g00918 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01126 Car-Chr3:9095471 Car15g00406 Car-Chr15:2112389 1.45E-126 dispersed
Car04g02507 Car-Chr4:19888638 Car03g01126 Car-Chr3:9095471 2.44E-15 dispersed
Car03g01126 Car-Chr3:9095471 Car06g00308 Car-Chr6:1710739 5.57E-12 wgd
Car03g01126 Car-Chr3:9095471 Car07g00918 Car-Chr7:5109008 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01126 - - csv:101203393 719.153