Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01137 ATGGACGAAGAGGCTAATTCTTGGCTTAGGAGAACCAAGTTTTCGCACACAGTTTATCATCGATGGGACTCATTAAGATTGAATCCTGTTCCTTTCGTCGTCGAACCACCACCTCGGAATTACGGCTTGAAATCGAGGCCTCAATCAGCTTCATCCGCCCAGAAACCAAATCCTGATATCTCAAAGATTCAGCGAAATTTCATAGCAAACAAACAGAGGTCTCTGTCTCCTCTTCCCGAGAGCAACCTCTCTGAAGTTTTCAAGGAAGCAAAATCCGCCAGTAAGAGATTCTCGACTCCAACGCCTCGACTTAGAGAACGAACTAGGGAATTCAAGAACAAGCTATTCAATAAGGACCCGCAAGATTCAAAATCGTCCACTTCCAAGACATCGTCGAATACCAGTCCCCTGAAACTCCTAGCTTCGGCCAAAGGGGGTGAAAAGTCAAAGTTCCGGAAGGACTCTTCCTGGACCAAATATTTCGATTCCGGTGGCGGAAAAGTCACAGCGGTCGAAACAGCCGACGACTGGAGCGTTGATCTATCCAAGCTGTTTGTTGGGTTAAGGTTCGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAACGATGAACCTGTTGCTGTTAAACTCATTAGAGTGCCTGAGGACGACGATAGTGGAGCGCTTGCTTCTCGATTGGAGAAGCAATTCACCAGAGAAGTAACCCTTTTATCTCGTCTCCACCATCCTAATGTTTTAAAGTTTGTAGCTGCGTGTAGGAACCCACCAGTTTACTGTGTCATTACTGAATATTTGTCTCAAGGATCATTAAGGGCGTACTTGCTCAAACTCGAGCGCCAATCTCTCCCTTTGCAGAAACTAATTGAGTTCTCTTTAGATGTGGCTCGTGGCATGGAATACATTCATTCCCAAGGCATAATCCATCGGGATCTCAAGCCTGAGAACGTTCTTATTGATGAGGACTTCCACCTGAAAATTGCAGATTTTGGGATAGCTTGTCCTGAGGCCTTTTTTGACCCATTAGCCGATGATCCCGGGACGTATCGATGGATGGCCCCGGAGATGATCAAACATAAACCCTATGGTCGAAAAGTTGATGTATACAGCTTTGGGCTCATGTTGTGGGAAATGGTGTCTGGTGCAATTCCTTACGAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAATAAGAATCTGAGGCCTGTTATCTCGAGCGATTGCCCGTTGGCAATGCGAGCTTTGATCGAGCAATGTTGGTCTGTGCAACCGGACAAGAGACCTGATTTCTGGCAGATTGTGAAGGTATTAGAGCAATTCGAAGCTTCGCTTGCCCGTGATGGGACACTGAGTTTAACGGGGAACCCGCGGTCGAGTTTCCAAGACCATAAGAAAGGGCTGCTCCATTGGATTCAAAAGCTTGGCCCTGGCCCCCTGCATCCTGAAACCTCATCCTCCTCGCCCGTGCCGAAACCGAAATTCTCGTAA 1497 47.09 MDEEANSWLRRTKFSHTVYHRWDSLRLNPVPFVVEPPPRNYGLKSRPQSASSAQKPNPDISKIQRNFIANKQRSLSPLPESNLSEVFKEAKSASKRFSTPTPRLRERTREFKNKLFNKDPQDSKSSTSKTSSNTSPLKLLASAKGGEKSKFRKDSSWTKYFDSGGGKVTAVETADDWSVDLSKLFVGLRFAHGAHSRLYHGKYNDEPVAVKLIRVPEDDDSGALASRLEKQFTREVTLLSRLHHPNVLKFVAACRNPPVYCVITEYLSQGSLRAYLLKLERQSLPLQKLIEFSLDVARGMEYIHSQGIIHRDLKPENVLIDEDFHLKIADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPYGRKVDVYSFGLMLWEMVSGAIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSVQPDKRPDFWQIVKVLEQFEASLARDGTLSLTGNPRSSFQDHKKGLLHWIQKLGPGPLHPETSSSSPVPKPKFS 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9152517 9155725 - Carg15295-RA Car03g01137 145189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01137 498 MobiDBLite consensus disorder prediction 38 60 - -
Car03g01137 498 MobiDBLite consensus disorder prediction 482 498 - -
Car03g01137 498 MobiDBLite consensus disorder prediction 100 119 - -
Car03g01137 498 Pfam Protein tyrosine and serine/threonine kinase 191 440 IPR001245 GO:0004672|GO:0006468
Car03g01137 498 MobiDBLite consensus disorder prediction 479 498 - -
Car03g01137 498 MobiDBLite consensus disorder prediction 44 60 - -
Car03g01137 498 MobiDBLite consensus disorder prediction 89 145 - -
Car03g01137 498 MobiDBLite consensus disorder prediction 120 139 - -
Car03g01137 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Car03g01137 498 ProSiteProfiles Protein kinase domain profile. 184 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01137 Car-Chr3:9152517 Car18g00156 Car-Chr18:842274 2.31E-114 dispersed
Car13g00524 Car-Chr13:7267270 Car03g01137 Car-Chr3:9152517 3.02E-38 wgd
Car18g00352 Car-Chr18:2176811 Car03g01137 Car-Chr3:9152517 0 wgd
Car03g01137 Car-Chr3:9152517 Car07g00203 Car-Chr7:1135574 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88744 PF07714 PK_Tyr_Ser-Thr 2.80E-59 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01137 - - cmax:111478573 962.214