Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01141 ATGGACGATGACAACCACCACTACGATCTGCCTCCACTCTCCTCCGCCACTCTCTCCGCCGCCACCATTCTCCTCTCCCATCCTCCTCCTCCTCCTCCTCCACAAGACTCCCATCTCCCACCTATTCTCTCACAACACTGCTTAGGCTTCTCCTCCCCCGCCCCAAAATCCTATTTTTTCACAAACCCTCCTCCTCCTCCTCCTCCTCCGCCTCCTCCTCCGCCCCCTCACGACCAACTCCCATCCCATTTCCCGCCTTCCTCCGCCTTCCTCTCCTACGGCTTCAACGATCTCACAACTTCTTTATTTCAAAAAGACGAAGGAAGAAGGGTTCTTGATGCTTGGAGTACCAAAGTGGCCAGAAGTAAGAGAAGACTCGCCCGCCAAAGAACCCTTACTTTAAGTCGAACCTCTTCTTCTTCCTCCTCCACCTCCGCCGCCTCCTCTTCCGGTTTTGGTTATAATAACGATGAGTATTCAAAGGGATTAATGGCTACCCACTTCCTGAACACCGATACACATAACAACGCCAATCCGAATAATTTTACCCTCTGCACGCCAGATAACAAGATTCTTAGAATGCTGCTGAAGAAGGACCTGAAGAACAGCGATGTGGGGTCTTTGGGCAGGATCGTCCTCCCCAAGAGGGAGGCAGAAGAGAATCTACCATTGCTCACTGATAAGGAAGGCATCCAAATTGTGATGAGAGAGGTCCACTCAAACAAAAAATGGGCCATGAAATACAAGTACTGGGCAAACAACAGAAGTAGAATGTATGTGCTGGAAAACACAGGTGATTTTGTTAGACAAAATGGTCTGAAGATGGGAGATTTAATGACCCTTTACGAGGATGAATGCAAGAACATGTACGTGGCGGTTGTGAAAGGTGAGAATGATTCAAGGGAAGAAAATGAGGAGCTGGTGAGGAACAACAACAACAAGAACAACAACAACAAGAACAACCAGCCGTGTTCTTTCACAAACATGTGCATTAAAGACGAAGAAGAGGACGCCTCTTTAGCTATGTTGATCGAAGAGCTCAAACACAAGCCAGAAGACGAGGACCGCCGGCTGTCCTGCAGCACCAGCACTAGCAGCAGCAACAGCAGCCACCACAACAACAACAACAACAACAACAACGCCCTCATGGCTTCGGATTCATATTTGAGCACTACTCCGCAGCCCTCCTCCTCCGATATGATGGGAGCTGCTGCAAAAGGGATTTATAATAGTATTAATAATAATAATAAGAAGAAGAATGGGAATAAGGAAGGGGGGGAGGATTTGCAGGCGGGGAATGGGTTGGAGGATTGCTTTAGAGGGCTTGATACTCTGCCGGAAGTTAGTGGATTCAAGTTCCCTCTTTTTGACTATTTGAGCAATGACAGAACGTGA 1395 48.17 MDDDNHHYDLPPLSSATLSAATILLSHPPPPPPPQDSHLPPILSQHCLGFSSPAPKSYFFTNPPPPPPPPPPPPPPHDQLPSHFPPSSAFLSYGFNDLTTSLFQKDEGRRVLDAWSTKVARSKRRLARQRTLTLSRTSSSSSSTSAASSSGFGYNNDEYSKGLMATHFLNTDTHNNANPNNFTLCTPDNKILRMLLKKDLKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQIVMREVHSNKKWAMKYKYWANNRSRMYVLENTGDFVRQNGLKMGDLMTLYEDECKNMYVAVVKGENDSREENEELVRNNNNKNNNNKNNQPCSFTNMCIKDEEEDASLAMLIEELKHKPEDEDRRLSCSTSTSSSNSSHHNNNNNNNNALMASDSYLSTTPQPSSSDMMGAAAKGIYNSINNNNKKKNGNKEGGEDLQAGNGLEDCFRGLDTLPEVSGFKFPLFDYLSNDRT 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9162474 9165390 - Carg15299-RA Car03g01141 145193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01141 464 MobiDBLite consensus disorder prediction 310 324 - -
Car03g01141 464 MobiDBLite consensus disorder prediction 297 324 - -
Car03g01141 464 MobiDBLite consensus disorder prediction 131 151 - -
Car03g01141 464 Pfam B3 DNA binding domain 198 294 IPR003340 GO:0003677
Car03g01141 464 MobiDBLite consensus disorder prediction 25 39 - -
Car03g01141 464 MobiDBLite consensus disorder prediction 117 151 - -
Car03g01141 464 Coils Coil 297 317 - -
Car03g01141 464 MobiDBLite consensus disorder prediction 360 399 - -
Car03g01141 464 MobiDBLite consensus disorder prediction 58 82 - -
Car03g01141 464 MobiDBLite consensus disorder prediction 348 401 - -
Car03g01141 464 MobiDBLite consensus disorder prediction 21 86 - -
Car03g01141 464 ProSiteProfiles B3 DNA-binding domain profile. 196 297 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01141 Car-Chr3:9162474 Car17g01158 Car-Chr17:8934830 9.02E-33 dispersed
Car03g01141 Car-Chr3:9162474 Car07g00200 Car-Chr7:1124618 1.33E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3195 PF02362 B3 1.60E-15 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01141 - - cpep:111804135 730.324