Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01154 ATGGAGTCCCACGTCCTCTCACGCGCCACTTCCTTCGCCGGCGGCATTTCCAGTCTCCGCAAGTTGCATAGGGAGACCACGTCTAACAACAGCCATATCGCCTTCGTTCAAACCAGGCCGATCGCCGAGGGAGCTAACTTGATTTGGGGAAGACAACTACGGCCGTCTCTACTTCTCGACAACCTCTCGACGCCGAATCTAGCATCGGCCAAACGGGAGACGCTTCGGCCTACCTTTGCGGCGGCCTCCTCTTCTCCCGCCGGAGGCAGCGATTCCGCTGGGGAAGCGAAGGTTGCTCCAGTGGGTTTCTTTGAGAAGTATCCGGCGTTGGTCACCGGATTCTTCTTCTTCATGTGGTACTTTTTGAACGTGATTTTCAATATCCTCAACAAGAAGATATATAATTACTTCCCCTATCCATATTTTGTGTCGGTGATCCATTTGCTCGTCGGAGTGGTGTACTGTTTGATAAGCTGGGCTGTCGGTCTTCCTAAGCGAGCACCTATTGACTCAACCCTTCTGAAGTTGCTGATCCCTGTGGCTTTCTGTCATGCACTCGGCCATGTCACTAGCAATGTCTCATTTGCAGCTGTTGCTGTCTCATTCACACACACAGTCAAAGCTCTGGAACCGTTCTTTAACGCCGCCGCTTCTCAATTCATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATGGCGTCCTTGACTGAGCTTTCATTTAACTGGACTGGCTTCATTAGTGCTATGATTTCCAATATCTCCTTTACCTACAGAAGTCTTTACTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTCTATGCCTATATTTCCATCATTGCTCTCCTTTTCTGCATTCCACCTGCTGTAATTGTGGAGGGGCCTCAGCTGCTGAAGTTTGGTTTCAACGATGCCATAGCCAAAGTTGGTGTAACCAAATTCGTGTCAGATCTCTTCTGGGTAGGGATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACCCTGGAGAGGGTGGCACCACTCACCCACGCAGTCGGCAATGTGCTGAAACGTGTATTTGTGATCGGATTCTCCATCATTGTCTTTGGCAACAAAATTTCAACCCAGACTGGTATTGGAACCAGCATCGCGATTGCAGGAGTGGCGCTTTACTCATACATCAAGGCTAAGATGGAAGAAGAGAAACGAGGTTTGCCTGTTCTCTTCCTTCGATCTTCATCTTTCAATTCCATGGAAGCTGCTGCCTCGGACGGCGAAAATCACAACCACAATAATGATGATATTAACAAAATTAGTAACTCAAGGGAGGGTCTTAGCAAGCCCAAGCGCCAGATGAAGACTCCCTTCCAGCTTGAAACCCTCGAGAAGGCCTATGCTTTGGACACGTACCCATCAGAGTCGACAAGGGCTGAACTGTCGGAGAAATTGGGGCTTACCGATCGGCAATTGCAGATGTGGTTTTGTCACAGGAGGTTGAAGGACAAGAAGGAACCGGCGAAGAAACCCCGGAAGGTGATGGCACCGGCGTTGCCTGATTCTCCCATTGACGAATTAAGAGTAGTGGCTGAGCCGGGTAGTGATTACGCTTCGGGGTCGGGCTCGGGTTCGAGTCCATTTGGTGATGTTGGGTTGCGTAATGTGGTACCTAGAAGTGTTGGAGATGATATGCCAATGATGAGAAGGTATTATGAACCTTCACGGTCTGTTATGGAACTTAGAGCTATTGCTTGCGTCGAATCGCAGTTAGGAGAGCCATTGAGGGAGGACGGACCTATTCTTGGGATTGAATTTGATTCACTACCACCTGATGCTTTCGGAGCACCTATAGTGGCAGAGCAGCAGAAGCGATCTGGCCATTCGTATGGGGAAAAATACGAACAACGGGATGCTAAATCAAATAAAGTGACTGCAAGGGGATTCACAGAATATCCATTTATGCCAGACCAATCTAATATTAGAGCTGATGCCTATGGTCCAGTTGCCCAACCACATTATCCAGACTCATTAGTTGAGGTTACAGCAGCCAGGACACCGTATTTGCTTGGTCATGAACAGCCGAACAGGAGCCACAATTACCATGGTCAGGTCTCAAGGGTTCGTCTTCTGTCTCAACAGGAGAAACAGGCAGTTACAATTCCATCTCCTGCTGAAGATAGCACGTGTGTCCCTCCAAGGGATTCTTTTGCAAGTATCAGAATGAATTCTCAGTTTACTGAACACCCAATTGTTGGACAAGAAAATTATGTGTTGGCTGATGGGCATGTTTTTCCAGAGGACGTCATGATTAGGATGGAAAGGAAACGCAAGAGTGAAGAAGCTCGTTTGAACAAAGAAGCTGAAGCCCATGAAATAAAAATGCGGAAAGAGCTTGAGAAACAAGATATTTTGAGGAAAAAGAGTGAAGAACGAATGAGGAGAGAAATGGAAAAGCAAGATCGCGAAAGAAGGAGAGAAGAGGAGAAGTTACTGCGAGAAAAGCAGCGGGAAGAGGAGAGATTGAAGCGTGAGGAAAGACGTGAACATGAACGGAAGGAGAAGTTTCTGCAGAGGGAGTATTTAAGGGCTGAAAAGAGGAGGCAAAAAGAAGCTATTCGCAAAGAAAAGGAAGCAGTGAGACGCCAAGCTGCTATTGAGAAGGCTACTGCTCGTAGGATTGCCCGTGAGTCTATGGAGCTTATTGAGGATGAACAGCTTGAACTGATGGAGCTGGCTGCTGCAAATAAAGGATTCTCCTCCATATTAAGTCTTGATCATGACACTTTGCAGAATCTTGAATCATTCCAAGATTATCTAGGTGCTTTTCCACCCAAGTCTGTGCAATTGAAAAAACCTTTCGGCATTCAGCCTTGGATCAATTCAGAGGAGAACATTGGCAACCTTCTCATGGTATGGAGATTTTTCATTACATTCTCTGATGTTCTTGAGCTATGGCCCTTTACCCTTGACGAGTTTGTGCAAGCTCTCCACGACTATGATTCAAGATTACTGGGTGAGATTCACATTTGTCTTCTGAGTCTGATTGTAAAAGATATCGAAGATGTTGCAAGAACACCTTCTGCTGGATTGGGAATAAATCAGAATGGTGTTGCCAACTCCGGAGGTGGACATCCTCAGATTGTTGAAGGGGCATATGCGTGGGGATTTGACATTTGCAACTGGCAGAAACATTTAAACCCATTAACATGGCCAGAAATATTTAGACAACTAGCACTATCAGCTGGATTTGGACCTCAGTTGAAGAAGAGGGGTTTGGCATGGTCTGAAATGCGTAGCAACGATGAGGCTAAATGTGGTGAGGATGTAGTTTCTACTCTCCGCAATGGTTCAGCAGCTGAAAATGCATTTGCTATCATGCAAGAGAAAGGTTTGCTAGCTCCTCGGAGATCTAGGCATCGGCTAACTCCTGGAACTGTCAAATTTGCTGCATTTCATGTCCTTTCACTAGAAGGAAGTGAGGGGTTAACAGTTCTAGAACTTGCTGAGAAGATACAGAGATCTGGACTTAGAGATCTGTCTACAAGCAAGACACCAGAGGCTTCCATTTCTGTTGCTTTGACAAGGGATACGAAGCTTTTTGAAAGAATTGCTCCTTCCACATATCGTGTGCGAGCTCCTTATAGGAAGGATCCAGATGATGCCGAGGAAATACTTTCAGTAGCCAGAAAGAAAATTCAGGTATTCCAAAATGGTTTTTTGGTTGGAGAAGATGCAGATGATGTTGAAAGAGACGAAGAATCTGAATGTGATGATGTTGATGAAGATCCTGAAGTTGATGATATGGCGACAACAGCTTTGGTGAATGAAGATGTTAGCAAAGGAGATGCTGACTTAGGAGTTGACAATGAGAATGTATGCCATGATATTGCTGGAAATCTACAAAATGCAGTTGCCAAAGATATACCGTCGTTCCCCCTAAGTGGCTCCAAGGACACAAAATATTTAAACATACCCACAGAGCAGTATGCTGCCATTGATGAGACTAATATTAGTGATCTTGATCAAGACAATATGGAGATTGATGAAAGCAAGGAAGGTGCATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTTAGTGTTGAGGAGCGCTTGAATGCCCTTATTGCCTTGACCAGCATTGCAAATGAAGGAAACTCTATTCGCCTTGTTCTTGAGGATCGTTTGGAAGCTGCCAATGCTGTTAAGAAGCAAATGTTGGCAGAGGCTCAGATTGATAAATCTCGTCTAAAAGAAGAGATCATTACTAAATCTGATTTTCCAATTCACATTGTGAGCAAAGTGGAAACTGAACACAATGGTTCCGCCATGGAGGGTGGGCAAAGCCCTTTTCCTGTTACTGAAAAGAAGAACGATGAAACAACCCCAAGCACTGTAGAAAACCTTGGTAATGTTTCTAATGAGAGGGCTACTTTAGTGCCAGATCTTTTCCCAGGCTCAGATAACTTTTTGGCTCAGCAATGTGGACATGCTTCAAAGAGGTCACGTTCACAGTTAAAATCTTATATTGCCCACAAAGCTGAAGAAATGTACACATACAGATCTTTGCCTCTTGGTCGAGATCGTAGGCATAATCGGTACTGGCAATTTGTTGCGTCCTCTTCAAGCAATGATCCTGGCTCTGGTAGAATCTTTGTTGAAATGTATGATGGAAAGTGGAGGCTTATTGATTCTGAAGAGGACTTTGATGCTCTTTCAATGGCTTTGGACACACGCGGGGTTAGAGAATCACACCTACGCATAATGTTGCAAATGATAGAGACGTCATTTAAGGAAAATGTTCGAAGGAGTCTGCAGTGTGGCAACGTGATGGTTCAAAGTGGAATTGCACCTAAACATGAAAACTATGAATTGAGTTTTAGTCCTGATTGCAACACTGGTTTTAACAGCCCTGGCAGTACCGTTTGCGGTTTAAATTTGGATACAGTGGTAACATCATCTTCATTCAGAATTGAGCTTGGGAGAAATGAAATCGAAAAGAATGCTGCATTTAGAAGGTATCAAGACTTGCAAAGGTGGATGTTAAGAGAGTGCTTTAGCACATCAACATTATGTGCCATGAAATTTGGAGAAAAAAGGTGCATATCGCTGCTGGACATTTGTGGTTCTTGTCTGTGCTTGTTTGAGTCCCAAAATTCTCACTGTCCTTCGTGCCATCAAACTTTTGGCACTAGTGAGAATGATATTAATTTTCTCGAACATAAACGTCACTGTGAGATGGAAAGGATGTCTAACCCTTTGGATGTACACATGTTGGATGCATCTCTTCCCCTCAAAAGTAGGTTGCTCAAGGCCCTCTTAGCTTTCATTGAGGTACATGTTCCGTTAGAAGCTTTTCAATCGTTCTGGACAGAACATAGGAAAGATTGGGGTGTCAGGATGAAATTATCACCATCTATTGAGGAGCTTCTACAGATATTAACCCTGTTTGAAAGTGCGGTTAAGCGAGACTTTCTAAAATCAGACTTTACTACAACAGACGAGCACCTGGGCTCATGTTCCGTCTCTGGGACTGTTACATCCGATATTGGGTCTGTTCCTACATTACCCTGGATTCCACGGACTAGTGCAGCTGTTGCTTTAAGGCTTTGTGAGGTAGATGCATCAATTTATTACATCGGGTGTGAGAAACCAGAGCCTGACCAGGATAAGGAAGTCGGAGAACATATAAACTTTTCCAACAGATATGTCCAGGTTAAGAATGAGGAGCGGACTAAACTAAACGACTTGGATTATGATGATCTAATGAAGAACGACAACTCAGCCAATCCAAAAGGTTTTAGGACCAGCTACAAACGCAGTCGAGGGAGTCGAGATTATGGACGCCGCAAAAAGTGGCAGAAAAAAGTTAACGGATCTAGATCTGGCCAAGTCCGGCAAAATGTCAAGAGTAACGAGAAGATGAATCAAGGACAGAGGGAGCTGGGACAAGGAACGCAAGTTATGGGCATACGGGGCCGCCGCACGGTAAGGAAGAGACGGGCTGAGAAGAGCATTCCAGATGAAGGACTGCTGGGGCTAATGCCTAGTAGTAGTACTCATAACATAGATGAATCCCCAAAAGATTATCTTGGGGAATGGGAGGATGAAAAAATGGATAGATTCATGGATATGGAAGATGAAGAGGAGAATGTGATAGAATGA 6186 44.71 MESHVLSRATSFAGGISSLRKLHRETTSNNSHIAFVQTRPIAEGANLIWGRQLRPSLLLDNLSTPNLASAKRETLRPTFAAASSSPAGGSDSAGEAKVAPVGFFEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWAVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSLYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGVTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVALYSYIKAKMEEEKRGLPVLFLRSSSFNSMEAAASDGENHNHNNDDINKISNSREGLSKPKRQMKTPFQLETLEKAYALDTYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKKEPAKKPRKVMAPALPDSPIDELRVVAEPGSDYASGSGSGSSPFGDVGLRNVVPRSVGDDMPMMRRYYEPSRSVMELRAIACVESQLGEPLREDGPILGIEFDSLPPDAFGAPIVAEQQKRSGHSYGEKYEQRDAKSNKVTARGFTEYPFMPDQSNIRADAYGPVAQPHYPDSLVEVTAARTPYLLGHEQPNRSHNYHGQVSRVRLLSQQEKQAVTIPSPAEDSTCVPPRDSFASIRMNSQFTEHPIVGQENYVLADGHVFPEDVMIRMERKRKSEEARLNKEAEAHEIKMRKELEKQDILRKKSEERMRREMEKQDRERRREEEKLLREKQREEERLKREERREHERKEKFLQREYLRAEKRRQKEAIRKEKEAVRRQAAIEKATARRIARESMELIEDEQLELMELAAANKGFSSILSLDHDTLQNLESFQDYLGAFPPKSVQLKKPFGIQPWINSEENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLGEIHICLLSLIVKDIEDVARTPSAGLGINQNGVANSGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLKKRGLAWSEMRSNDEAKCGEDVVSTLRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPDDAEEILSVARKKIQVFQNGFLVGEDADDVERDEESECDDVDEDPEVDDMATTALVNEDVSKGDADLGVDNENVCHDIAGNLQNAVAKDIPSFPLSGSKDTKYLNIPTEQYAAIDETNISDLDQDNMEIDESKEGASWIQGLTEGEYHDLSVEERLNALIALTSIANEGNSIRLVLEDRLEAANAVKKQMLAEAQIDKSRLKEEIITKSDFPIHIVSKVETEHNGSAMEGGQSPFPVTEKKNDETTPSTVENLGNVSNERATLVPDLFPGSDNFLAQQCGHASKRSRSQLKSYIAHKAEEMYTYRSLPLGRDRRHNRYWQFVASSSSNDPGSGRIFVEMYDGKWRLIDSEEDFDALSMALDTRGVRESHLRIMLQMIETSFKENVRRSLQCGNVMVQSGIAPKHENYELSFSPDCNTGFNSPGSTVCGLNLDTVVTSSSFRIELGRNEIEKNAAFRRYQDLQRWMLRECFSTSTLCAMKFGEKRCISLLDICGSCLCLFESQNSHCPSCHQTFGTSENDINFLEHKRHCEMERMSNPLDVHMLDASLPLKSRLLKALLAFIEVHVPLEAFQSFWTEHRKDWGVRMKLSPSIEELLQILTLFESAVKRDFLKSDFTTTDEHLGSCSVSGTVTSDIGSVPTLPWIPRTSAAVALRLCEVDASIYYIGCEKPEPDQDKEVGEHINFSNRYVQVKNEERTKLNDLDYDDLMKNDNSANPKGFRTSYKRSRGSRDYGRRKKWQKKVNGSRSGQVRQNVKSNEKMNQGQRELGQGTQVMGIRGRRTVRKRRAEKSIPDEGLLGLMPSSSTHNIDESPKDYLGEWEDEKMDRFMDMEDEEENVIE 2061
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9215317 9231728 - Carg15312-RA Car03g01154 145206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01154 2061 MobiDBLite consensus disorder prediction 1929 1986 - -
Car03g01154 2061 ProSiteProfiles DDT domain profile. 967 1026 IPR018501 -
Car03g01154 2061 MobiDBLite consensus disorder prediction 426 459 - -
Car03g01154 2061 MobiDBLite consensus disorder prediction 626 646 - -
Car03g01154 2061 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1357 1397 IPR028942 -
Car03g01154 2061 Pfam HB1, ASXL, restriction endonuclease HTH domain 1149 1217 IPR007759 GO:0006355
Car03g01154 2061 Coils Coil 774 805 - -
Car03g01154 2061 MobiDBLite consensus disorder prediction 1461 1475 - -
Car03g01154 2061 MobiDBLite consensus disorder prediction 1965 1986 - -
Car03g01154 2061 MobiDBLite consensus disorder prediction 2016 2039 - -
Car03g01154 2061 Pfam DDT domain 968 1023 IPR018501 -
Car03g01154 2061 ProSiteProfiles HARE-type HTH domain profile. 1149 1218 IPR007759 GO:0006355
Car03g01154 2061 Coils Coil 2052 2061 - -
Car03g01154 2061 MobiDBLite consensus disorder prediction 1446 1475 - -
Car03g01154 2061 Coils Coil 1407 1427 - -
Car03g01154 2061 MobiDBLite consensus disorder prediction 630 646 - -
Car03g01154 2061 MobiDBLite consensus disorder prediction 808 853 - -
Car03g01154 2061 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1528 1598 IPR028941 -
Car03g01154 2061 Pfam Triose-phosphate Transporter family 111 398 IPR004853 -
Car03g01154 2061 Pfam Homeodomain 453 509 IPR001356 GO:0003677
Car03g01154 2061 ProSiteProfiles 'Homeobox' domain profile. 450 510 IPR001356 GO:0003677
Car03g01154 2061 Coils Coil 810 887 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01058 Car-Chr2:7374849 Car03g01154 Car-Chr3:9215317 2.59E-13 dispersed
Car03g01154 Car-Chr3:9215317 Car19g00696 Car-Chr19:8067077 3.49E-158 dispersed
Car07g01239 Car-Chr7:7648362 Car03g01154 Car-Chr3:9215317 5.23E-09 dispersed
Car16g00851 Car-Chr16:6217793 Car03g01154 Car-Chr3:9215317 4.10E-64 dispersed
Car18g00163 Car-Chr18:891626 Car03g01154 Car-Chr3:9215317 7.89E-59 dispersed
Car20g00090 Car-Chr20:485057 Car03g01154 Car-Chr3:9215317 1.62E-13 dispersed
Car20g00894 Car-Chr20:9416935 Car03g01154 Car-Chr3:9215317 5.72E-07 dispersed
Car09g01028 Car-Chr9:6967836 Car03g01154 Car-Chr3:9215317 6.48E-64 transposed
Car03g01154 Car-Chr3:9215317 Car07g00186 Car-Chr7:1059869 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3198 PF03151 TPT 3.70E-108 CL0184 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01154 - - cmo:103484497 2753.39