Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01160 ATGGGTGCTCTCATCGATCTTAATACCACCGAAGAAGATGAATCTCCCTCTTCTGCTGCTTCCTCTGTTTCTTCTTCCTCTGCTTCTGCTCTGACCTCCTCTCCTTCGCCTTCTCTTACCTCTTCTATTTGCTTGGAGCTATGGCATGCTTGTGCTGGCCCTCTCACCTCTTTGCCCAAGAAAGGGAACTTGGTTGTCTACTTGCCGCAGGGTCACTTGGAGCAGATGCAAGAATTTCCGGCTACGCCCTCTGATCTCCCTCCCCACATCCTCTGTCGCGTCATTGATGTTCAGCTTCACGCTGAGGCTGGGAGTGACGAGGTTTATGCTCAGGTTTCATTGCTTCCTGAAAACGAGCAAATGGAGCACAAGATGCAGGAAGAGATGAGCAATGACATTGAAGAGGAGGATGTTGAAGAAGGTGAGAAGACCACAACACCTCACATGTTCTGCAAGACCCTTACTGCTTCAGACACTAGTACTCATGGAGGATTCTCCGTCCCCAGGCGTGCAGCGGAGGATTGCTTCCCGCCATTGGATTATAATCAACAGAGGCCTTCACAAGAGCTTGTTGCAAAGGATCTCCTTGGGCTAAAATGGAAGTTCAGGCACATATATCGTGGGCAGCCTAGAAGGCATTTGCTAACCACTGGATGGAGTGCATTTGTGAACAAGAAAAGGCTTGTTTCTGGTGATGCAGTGCTTTTTCTTAGGGGAAACGATGGTGAATTAAGACTGGGAATACGAAGAGCTGCACATCTTAAAAGTGGTTCTACATTTTCTAATATTTGCAGTCAGAAGCTCAACTCTAGTAGTATCATGGATGTGGTTAATGCTATATCTTCCAAAAGTTCCTTCAGCGTATGCTACAATCCTAGGGCTACCTCTTCACAGTTTGTCTTGCCTTTTCATAAGTTCTTGAAGAGCATGAACCGTTCCTTCTCTGTTGGAATGAGGTTTAGGCTGAGTTTCGAAACCGAAGACGCTGCTGATCTGAGACACACTGGACATATAACTGGAATTGGCGATGTTGATCCTATCGGATGGCCGGGATCACGGTGGAGGTCCCTTATGGTGAGGTGGGACGACCGTGAAATCAACAGGCATGGCAGGGTTTCGCCTTGGGAGATCGAGCCCTCTGGTTCTGTTTCTATGTCTAGCAACTTGGTTCCACCTGGTCTGAAAAGATCCAGGATTGGTCTCTCTTCCACAAAACTAGAGTTTCCAGTTCCACATGGGATTGGAGCAACAGACTTTGGTGAATCTTTAAGGTTCCATAAGGTCTTGCAAGGTCAAGAAATTTTAGGCTACAATACTCCCACTGACTGTGATGACAACCCTCGTTATCATCCACCTGAGAAGAGGAGATTGTTGCCTGACTTACATGGTTCTGGTATAGCTCTGATGAGAAATGGTCCCAGAAACCGACTTATCAACTCCGAAACTTCCTCACGGGGTTTCGTGTTTGATGAATCCTTCCAATTCCAAAAGGTCTTGCAAGGTCAAGAAATATTTCCAGGTCCCTTTTATGGTAGGACCATGGCCACCAATGAAGTTAAGGAAAGTGGTGGTTGCGGTCCTGTCGATGGTTTTCGATTGTCTACGACTAGAGATGGATGGCCCACGCCAATGCAATGTGAAAACTTCCACACACGCTCTTCCATTCCTTCTGCTCAAGTCTCATCACCATCTTCTGTATTCATGTTTCAGCAGTCAATGGTTCCTGTCCTAAGCTTTGATTCACATAACCGTGGGATTATGAACAAAAGTACATCCCATAATTCTGGGACAGCATTTACGACCGACAATAGCATGTGTCCCACTTCATTGGGCGAGCTGAATCTGCTGGGCCTATCCCATCCTTCTACAACAACAGCTTCAGCGTTTTCAGGTAGTAAAGATCTGTCTTCAACTACCAAAGCTGGCTGCAGATTGTTTGGGTTTTCATTGACAGAGGAAAAGAATGTTGGGAATACAGACAAGGGTTCTCCAGCAACAACTCCCATTCATGCAGGAACCACCATTGGAGCTCAATGTCCTTTGAAGTCTCCTCTGATGAGCAAGGTGGTTGGAAGCAACTGTACCAAACGTCGTCTTTCGCAAGATTTCTCAGAAAGCACAGAAGAAAAGAGAAATGGTGAGCCTGGAACGGACTCCCACATGGGCAGTGGCGACAGTTTGTTTTTTGCTGATTCTGATATCCATTTGCACAGATTTTTGAGCATGAAGAGGAGAAAATCGCTAAGGCGGGCTCTGGACAATATCAAATCGGAGTTGATGCTTTTGGGATTCGTATCGCTGTTATTGACGGTGAGCGAGAAAGCAATTGCTAACATTTGCATCCCTAAGAGTTCGAACAAAATATTTCTTCCCTGCCCGACTACGAATTCGGCCACTTACTTCGTGGAAGAACCCAAGTGTGATTCACAGGCCAAAGCCTCGTTGATATCTAGAGACGGTGCAAAGCAGGTCAAGTATTTGATCATCTGTTTAGCCTTTGTTCACATCTTTTCCAGTCTCCTCACTTACAGTCTTGGAATCGCCAAGATGAGGAGATGGCAGTACTGGGAAGCAAAAACCAGAACGTTGGAGTATCAATTTACAACCGATCCAAGAAGATTTCAATTTGCTCGTCAAACATCCTTTGGAAAGAGGCATCTCAAATTCTGGAGCGACCATCACATTCTTCGATGGCCGGCCTGTTTTCTTAGACAATTTTATGAATCTGTCTCCGCAGCCGATTATCTCACTCTTAGACATGGTTTCATTGCGGCCCATCTTGGGGAAGGAACCAACTTCGATTTCCAAAACTATATAACAAGAGCTCTAGATAATGACTTCAGCGTGATGCTTTTGTTGGTTGGGACAAAGCTACAAGGCATCATGACTGAGATGTGCTTGGACAGCCATGGGAAGTCCCATGTCGTCCGAGGAACTCTGCTCAATTCTTTTCAATTAGCATTCTTTGCATGGGCATGGCTGAAATTTGGGATGAGATCGTGCTTTCAAAGAGAGATTTCAGATTGGGTAATAGGAGTTGCGGTGGGTGTGCTGGTGCAGTTCATTTGTGGCTATGTCACTCTGCCTCTCTATGCTCTGATGGGGAGCTCGATGAAGAAAACGGTGTTCACGGAGGGGGTAGTTGAAGGGCTGAGGAAATGGAAAGGGAGAGCGAAGAAAAGGGTAGCTCGAAGAAGGCAAAGAGGGCGCCATGGCTGCGACTGCAACTTCCCGCATTCCTCGCCGCGTGCATCAGTTGACGCTGGGGTTGACTCGCCACCTTCTTTCAGACTTGAGGCAGCGGCAATGGGAATGGCATCTGTGGATTGTGGTCGTATACAAGGGGCGGGTGGGAACAATAAACATTATAATACTTGTTCGGATTCTGCTGCTCTTTCAAGTTGTGACGATGATGATAAGCTAAAAGGCAAACGTCCAGTTGACGAGCCGGATCACAAGCCCAGCTCCTTCGATGGCTTTGACTGGGCTACCAAAATACACCGCAATTTTTCACGACATGCAATGTAG 3528 46.68 MGALIDLNTTEEDESPSSAASSVSSSSASALTSSPSPSLTSSICLELWHACAGPLTSLPKKGNLVVYLPQGHLEQMQEFPATPSDLPPHILCRVIDVQLHAEAGSDEVYAQVSLLPENEQMEHKMQEEMSNDIEEEDVEEGEKTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAHLKSGSTFSNICSQKLNSSSIMDVVNAISSKSSFSVCYNPRATSSQFVLPFHKFLKSMNRSFSVGMRFRLSFETEDAADLRHTGHITGIGDVDPIGWPGSRWRSLMVRWDDREINRHGRVSPWEIEPSGSVSMSSNLVPPGLKRSRIGLSSTKLEFPVPHGIGATDFGESLRFHKVLQGQEILGYNTPTDCDDNPRYHPPEKRRLLPDLHGSGIALMRNGPRNRLINSETSSRGFVFDESFQFQKVLQGQEIFPGPFYGRTMATNEVKESGGCGPVDGFRLSTTRDGWPTPMQCENFHTRSSIPSAQVSSPSSVFMFQQSMVPVLSFDSHNRGIMNKSTSHNSGTAFTTDNSMCPTSLGELNLLGLSHPSTTTASAFSGSKDLSSTTKAGCRLFGFSLTEEKNVGNTDKGSPATTPIHAGTTIGAQCPLKSPLMSKVVGSNCTKRRLSQDFSESTEEKRNGEPGTDSHMGSGDSLFFADSDIHLHRFLSMKRRKSLRRALDNIKSELMLLGFVSLLLTVSEKAIANICIPKSSNKIFLPCPTTNSATYFVEEPKCDSQAKASLISRDGAKQVKYLIICLAFVHIFSSLLTYSLGIAKMRRWQYWEAKTRTLEYQFTTDPRRFQFARQTSFGKRHLKFWSDHHILRWPACFLRQFYESVSAADYLTLRHGFIAAHLGEGTNFDFQNYITRALDNDFSVMLLLVGTKLQGIMTEMCLDSHGKSHVVRGTLLNSFQLAFFAWAWLKFGMRSCFQREISDWVIGVAVGVLVQFICGYVTLPLYALMGSSMKKTVFTEGVVEGLRKWKGRAKKRVARRRQRGRHGCDCNFPHSSPRASVDAGVDSPPSFRLEAAAMGMASVDCGRIQGAGGNNKHYNTCSDSAALSSCDDDDKLKGKRPVDEPDHKPSSFDGFDWATKIHRNFSRHAM 1175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9254689 9262705 - Carg15318-RA Car03g01160 145212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01160 1175 Pfam B3 DNA binding domain 150 251 IPR003340 GO:0003677
Car03g01160 1175 MobiDBLite consensus disorder prediction 10 36 - -
Car03g01160 1175 MobiDBLite consensus disorder prediction 1 36 - -
Car03g01160 1175 Pfam Mlo family 736 950 IPR004326 GO:0006952|GO:0016021
Car03g01160 1175 Pfam Mlo family 981 1071 IPR004326 GO:0006952|GO:0016021
Car03g01160 1175 MobiDBLite consensus disorder prediction 700 723 - -
Car03g01160 1175 MobiDBLite consensus disorder prediction 701 716 - -
Car03g01160 1175 ProSiteProfiles B3 DNA-binding domain profile. 150 252 IPR003340 GO:0003677
Car03g01160 1175 MobiDBLite consensus disorder prediction 1137 1158 - -
Car03g01160 1175 Pfam Auxin response factor 277 357 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01160 Car07g00181 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01160 Car-Chr3:9254689 Car20g00416 Car-Chr20:2338120 6.94E-132 dispersed
Car03g01160 Car-Chr3:9254689 Car07g00181 Car-Chr7:1040486 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3200 PF03094 Mlo 4.50E-53 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01160 K14486 - csv:101220018 1165.98