Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01162 ATGGGAAAACATTCGAAGACCAGTTGCAAGTCGGCTTCCCACAAGCTATTTAAGGATAAGGCAAAGAACCGGGTCGATGATCTGCAAAACATATTTGTAGATTTGCAGTATGCAAGGAAGGAGAGCCGCACGGTTGATGTGTCAGTTCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAATCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTTTTGGGTCATTTTCATCGGACATTTGTCGATTGTTACAACTTTGTGAGGAGGATGATGATGCGTCTAGTCCATTAGCTGCTCCTAAGCCTGAACCTAAAGAACAAAATTTGCAGGTTGGAGATGCTATGGCACATCAGGAGGTTCTTAGTATCACTATTAACCTACTTCAGGGATTTAATGTGAATCGTATACACCAAGAACCAAGCTTCCCTCTAGTTGATCAATGCAAGAACTCCCCATCAGGAGTTCATGGTATGGTTATGAATAACATGGAAGGACCTACACATTCGGAGTGTCATCCGTTTGATTTACAGCAAGGCATTGAGCACAACTTTTACACTATCCTTAATGCTAGAGGTTTGTGTGGAGAGGGTGCAATTCCTCATGTTTCTGGCTACTGTCCCAGCATTTGCCCTCCACCTGCTGCTTTTTTAGGCCCAAAATGTGCGCTTTGGGATTGCCCGCGACCTGCCCAAGGGATGGATTGGTGTGGGGACTACTGTAGCAGTTTTCATACTGCCTTAGCATTGAATGAAGGCCCTCCTGGAATGGGTCCGGTGTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGGGCAAAGGCACAAGGGAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAGCTTTTTGATCTGTCAATACTGGAGGGTGAGATGATTAGGGAGTGGCTATTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGAAAGCAGAGGTCTTTGCCTGATTACAGTGGACGTGGTTGGCATGAATCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCTTATTATATGGATCCTCAGCCACTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAATAAGTACGACGCCTGTGCTTTGTATCGATTGGAGCTGAAACTTGTTGATGGGAAAAAAGGTTCCAAGGCAAAGGTAACCAACGATTCAGTTACTGATTTACAGAGGCAAATGGGGAGACTGACTGCTGAATTTCCTGATAATAAACGCCTTGTGAAGGGGAGGACCAGAATTAACACAAAAGTTGGTATTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCACCCAATGGAACATATGACTATATGCTGCATGCACAATATGATTACCTGGTGGAGAATTTGAGCGAATATTACCTTACATAG 1482 44.74 MGKHSKTSCKSASHKLFKDKAKNRVDDLQNIFVDLQYARKESRTVDVSVLEEQVHQMLREWKSELNEPSPASSLQQGGSFGSFSSDICRLLQLCEEDDDASSPLAAPKPEPKEQNLQVGDAMAHQEVLSITINLLQGFNVNRIHQEPSFPLVDQCKNSPSGVHGMVMNNMEGPTHSECHPFDLQQGIEHNFYTILNARGLCGEGAIPHVSGYCPSICPPPAAFLGPKCALWDCPRPAQGMDWCGDYCSSFHTALALNEGPPGMGPVLRPGGIGLKDGLLFAALRAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKVTNDSVTDLQRQMGRLTAEFPDNKRLVKGRTRINTKVGIGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9272624 9276552 + Carg15320-RA Car03g01162 145214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01162 493 MobiDBLite consensus disorder prediction 99 118 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01162 Car07g00179 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01162 Car-Chr3:9272624 Car20g00557 Car-Chr20:3061332 3.00E-177 dispersed
Car03g01162 Car-Chr3:9272624 Car07g00179 Car-Chr7:1027515 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3201 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01162 - - csv:101219536 939.873