Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01191 ATGGCCGATCGGCCGGACTCTGACAAGAAGTCCGAAAGCACCAGGAAGGACATGCCGGCTCTTCTTTTGGGGCGGTACGAGATCGGGAAGCTCCTTGGGCATGGGACTTTTGCAAAGGTCTATCATGCCCGAAACATCAAATCCGACGAAGGTGTCGCCATTAAAGTCATCGATAAGGAGAAGATTCTCAAGGGCGGACTAATTGCCCACATCAAACGCGAGATCTCAATCCTCCGCCGGGTTCGACATCCCAACATTGTGCAACTTTTTGAGGTTATGGCCACCAAGACCAAGATCTACTTCGTTATGGAATACGTCCGTGGCGGCGAGCTCTTCAAGAAGGTCTCCAAGGGCCGATTGAAGGAAGAGGTCGCCCGAAAGTATTTTCAGCAATTAATTTCCGCCGTTTCCTTTTGCCACGCGCGTGGTGTTTATCATCGCGACCTTAAGCCGGAGAATTTATTGCTCGATGAAAATGGGGATCTCAAGGTCTCCGATTTTGGCCTAAGCGCCGTCTCCGATCAAATTCGACAAGATGGGTTGTTTCATACTTTCTGTGGTACACCGGCGTATGTTGCTCCGGAGGTATTGGCCCGCAAAGGCTACGAGGCCGCTAAGGTCGATATTTGGTCATGTGGGGTTATTCTGTTTGTTCTGATGGCAGGCTATTTGCCCTTCCACGACCAAAACATCATGGCAATGTATAAGAAGATCTACAAGGGGGAGTTCCGGTGTCCGAGATGGTTCTCGCCGGAGCTAGTTCGACTCCTGTCTCGTCTTTTGGATACAAATCTGGAAACCCGTTTCACAATTCCAGAAATCATGGAGAATCGATGGTTCAAAAAGAGGTATAAGCATATAAAATTCTACATCGAAGATGATAAAGTGTGCAACGTGGAGGACGACACCCAAGATGTGGATTCCATGTCGGATCAATCTCAATCGGAATCGGATTCCGAGTTCATTGAGACAAGAAGAAAGATGGGTTCACTCCCAAGACCGGCGAGTTTGAATGCATTCGATATAATATCATTTTCCCCGGGATTTGACCTTTCCGGGCTGTTCGAGGATGGAGGGGAGGAGGCAAGATTCGTGTCCAGTGCTCCAGTGTCGAAGATTATATCGAAGCTGGAAGATATCGCAAAATTGGTGAGTTTTAGCGTGAGGAAGAAGGACTGCAGGGTTAGCTTAGAGGGCACACGGGAAGGCGTGAAAGGGCCATTGACGATCGCGGCGGAGGTGTTCGAGTTGACGACGAAACTGGTGATGGTGGAGGTGAAGAGGAAAGGGGGCGACAAAACAGAGTATGAAGAGTTCTGTAACAAGGAATTGAAACCGGCATTGTTGAATCTGAAGGAGGAGGCGGGGGCAGGTGCTCCGTCACACATACCTTCAGATTCTGAATGA 1407 49.25 MADRPDSDKKSESTRKDMPALLLGRYEIGKLLGHGTFAKVYHARNIKSDEGVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFKKVSKGRLKEEVARKYFQQLISAVSFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYKGEFRCPRWFSPELVRLLSRLLDTNLETRFTIPEIMENRWFKKRYKHIKFYIEDDKVCNVEDDTQDVDSMSDQSQSESDSEFIETRRKMGSLPRPASLNAFDIISFSPGFDLSGLFEDGGEEARFVSSAPVSKIISKLEDIAKLVSFSVRKKDCRVSLEGTREGVKGPLTIAAEVFELTTKLVMVEVKRKGGDKTEYEEFCNKELKPALLNLKEEAGAGAPSHIPSDSE 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9389559 9390965 - Carg15349-RA Car03g01191 145243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01191 468 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Car03g01191 468 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01191 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car03g01191 468 MobiDBLite consensus disorder prediction 303 324 - -
Car03g01191 468 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01191 468 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165
Car03g01191 468 Pfam NAF domain 334 390 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01191 Car-Chr3:9389559 Car03g00265 Car-Chr3:3839361 2.73E-176 dispersed
Car13g00481 Car-Chr13:7049770 Car03g01191 Car-Chr3:9389559 0 wgd
Car03g01191 Car-Chr3:9389559 Car07g00152 Car-Chr7:901940 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88746 PF00069 Pkinase 1.00E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01191 - - csv:101214053 844.728