Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01201 ATGCCACAAACATCAATTGATAAGGCCCCAAGTCGTCAAGTTATTTCAATCATAGATTCACTTTGCGATGATGTTAGGAATACCGTTTTTGTTGTCAGTGGAAGAGGGCGTGAAAGTTTGGGCAACTGGTTTTCTTCTTGCGATAAACTTGGAATTGCTGCCGAGCATGGCTACTTTATGAGGTGGTCTGCCGATAAGGACTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATCGCAGAGCCAGTCATGAAATTATATACAGAAGCAACTGACGGCTCTTCTATTGAAACCAAGGAAAGTGCCTTGGTGTGGCACCACCGGGATGCAGACCCTGATTTTGGTTGCAGTCAGGCCAAGGAACTGTTGGATCACCTTGAAAGTGTGCTGGCAAATGAACCAGTCGCTGTAAAAAGTGGTCAGTTTATTGTAGAAGTGAAGCCACAGGGAGTCAGTAAAGGTTTGGTGGCAGAAAAGATCTTCACGTCAATGACGGACGCAGGCAGACGAGCTGATTTTGTGCTATGCATTGGTGATGATAGATCTGATGAAGACATGTTTGAGATCATTGGTCATGCAGTATCAAGTGGCGTCCTCTCTTCCAATACATTAGTTTTTGCCTGCACAGTCGGACAGAAACCAAGCAAGGCCAAGTATTACTTGGATGACACAACTGAGGTCATAAACATGCTTGAAGCCCTTGCAGAAGTTTCAGACATTTCTTCTCCTCCAGAATCCCCTTGA 753 44.89 MPQTSIDKAPSRQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSSCDKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHRDADPDFGCSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFTSMTDAGRRADFVLCIGDDRSDEDMFEIIGHAVSSGVLSSNTLVFACTVGQKPSKAKYYLDDTTEVINMLEALAEVSDISSPPESP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9431037 9432976 + Carg15359-RA Car03g01201 145253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01201 250 Pfam Trehalose-phosphatase 4 227 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01201 Car-Chr3:9431037 Car10g00127 Car-Chr10:601967 1.32E-107 dispersed
Car19g00792 Car-Chr19:8586811 Car03g01201 Car-Chr3:9431037 3.22E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01201 K16055 - csv:101213082 491.886