Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01214 ATGGCACTTGAACCTCTTGTTTTTATTCAGGAGGGCTTTCAGAGACGAGCTTGCATTGCTTCAGAAAATACGACACCCCAATGTTGTTCAGTTTCTAGGTGCTGTTACTCAAAGTTGGCCGATGATGATAGTTACAGAATATTTGCCAAAGTTGGAACCTTGATTGAATTTTGTTTTCTTCTGTTTTTGATACAGGGAGATCTTGCAGCATTATTGGGCAGAAAAGGAACACTAAAAACCATGACCGTTGTGAGACTTGCCCTTCATATTGCAAGGGGGATGAATTATTTGCATGAGAACAAGCCAGCACCAATTATTCATCGTGATCTTGAGCCTTCAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCGGACTTTGGAGTTAGCAAGTTATTGACGGTTAAAGAAGATAAACCTTTGACCTGTTCAGAGACTTCACGGAGATATGAAGCTCCGGAGGTTTTCAAAAATGAAGAATATGACACAAAGGTGGACGTATTTTCATTTGCTTTGATTTTACAAGAGATGATTGAAGGCTGTCCTCCATTTCCCGACAAGCGAGATAGTGAAGTTCCTAAATTGTATGCAGCAGGTGAACGTCCACCATTTAAAGCACCACTTAAACGTTATGCAAACGGACTAAAAGAGCTAATTGAAGAATGCTGGAATGAGAAGCCAACTAAAAGACCTACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAATAGATTCGGTCATAAGAGGCGCTGGAAGGTCAGGCCATTGAAATTCTTCCAGAATATTGAGGCGATGTTGAAGAAAGATCGTTCCCGTCAAAACAGTTTGAATCTATCAACACATTCTTCTGCCAGCAGTATATGA 873 40.44 MALEPLVFIQEGFQRRACIASENTTPQCCSVSRCCYSKLADDDSYRIFAKVGTLIEFCFLLFLIQGDLAALLGRKGTLKTMTVVRLALHIARGMNYLHENKPAPIIHRDLEPSNILRDDSGHLKVADFGVSKLLTVKEDKPLTCSETSRRYEAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFPDKRDSEVPKLYAAGERPPFKAPLKRYANGLKELIEECWNEKPTKRPTFRQIITQLEFIYNRFGHKRRWKVRPLKFFQNIEAMLKKDRSRQNSLNLSTHSSASSI 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9473607 9476454 + Carg15372-RA Car03g01214 145266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01214 290 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01214 290 Pfam Protein kinase domain 65 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01214 Car18g00413 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00034 Car-Chr2:280441 Car03g01214 Car-Chr3:9473607 1.57E-69 dispersed
Car03g01214 Car-Chr3:9473607 Car20g00218 Car-Chr20:1256883 2.85E-75 dispersed
Car04g01717 Car-Chr4:9841456 Car03g01214 Car-Chr3:9473607 8.62E-26 dispersed
Car03g01214 Car-Chr3:9473607 Car18g00413 Car-Chr18:2588834 1.57E-100 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88749 PF00069 Pkinase 5.50E-37 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01214 - - csv:101215728 384.415