Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01237 ATGGAGAAAGAGCCTCTTCTTCCGTATATGAGCCCAAGGGGGAAGCCGCTTCCTCCACCTCCTCAATTATTATGTCCACTCCCTGAAAACGATGAAATTACTCTCCCTATGACACCCACGGAGTTCAAAGACCGCCTGATCTTCGGTCCTTCATCGTCTCCGCAAGACACTTCTCCCATATTCGACGCCTTGACGCTCTCCCTTTCCTCCTCAAGACCCTCTGCTTCATCTTCTCTTCAGGACCCATCTACACCTTTGGCCCCAAAATCCCAATCGCCGTCTCAACAGGCATGGCTTGTGGATTCCGATTACTCATGGCACAAAAGCAACCTCCACCGCTCCAAAACCGCACCTGCCATGGCCGTCATCAACGATGTGAACCATTCGCAAGAGCCCAAACCACAATTTGGTAAGCAATCTATTATCCGCCAAGCTGTTGTTCTTCTAATTCTTTACTTATCATTGGGCGTGCTTATCTATTGGATTAATCGTGATAAGTTTTCGGCTCACGAGACTCACCCTGTGGTCGATGCATTGTACTTTTGCATAGTAACTATGTGCACTATTGGGTATGGAGATATCACGCCCAATAGTGCTGCGACGAAGCTGTTCTCCGTATTGTTTGTGTTGGTGGGATTCGGATTTATTGATATATTACTCTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGGAATGTAAAGAGAGGGGTGCAGCGTGAATCTGGGAAATCCTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCTCTGGCCTTGGGTGTTGTGGTTCTTTGTATAGGACTTGGCATGGGTGTTATGCATTTTGTTGAAAATCTGGGTTGGTTGGATTCATTTTATCTTTCAGTTATGTCTGTCACAACAGTTGGATATGGTGATCAGGCGTTCAAGTCGATGACTGGTCGTATTTTTGCTTCGATTTGGTTGCTTGTATCGACCCTTGCTGTCGCTCGGGCGTTTCTTTATTTGGCAGAGGCAAGGGTAGATAAGCGGCATAGGATGATGGCAAAGTGGATACTTGGTCAGGATATGACTGTCTCTGAGTTTCTTGCTGCTGATACCGACAACAATGGCTGTGTGAGTAGGTCAGAGTATGTGTTATACAAGCTGAAGGAGATGGGAAAGGTATCAGAGAAAGATGTGATGCAGATATCTAATAACTTTGATAGACTAGACACTGGCAACTGTGGGAAGATTACACTGGCCGATCTCTTGGAAAGTCATCACTGA 1281 45.36 MEKEPLLPYMSPRGKPLPPPPQLLCPLPENDEITLPMTPTEFKDRLIFGPSSSPQDTSPIFDALTLSLSSSRPSASSSLQDPSTPLAPKSQSPSQQAWLVDSDYSWHKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLILYLSLGVLIYWINRDKFSAHETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQRESGKSYIIDVKKGRMRIRMKVALALGVVVLCIGLGMGVMHFVENLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADTDNNGCVSRSEYVLYKLKEMGKVSEKDVMQISNNFDRLDTGNCGKITLADLLESHH 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9568600 9572269 + Carg15395-RA Car03g01237 145289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01237 426 MobiDBLite consensus disorder prediction 11 26 - -
Car03g01237 426 MobiDBLite consensus disorder prediction 1 33 - -
Car03g01237 426 Pfam Ion channel 272 341 IPR013099 -
Car03g01237 426 Pfam Ion channel 148 227 IPR013099 -
Car03g01237 426 ProSitePatterns EF-hand calcium-binding domain. 370 382 IPR018247 -
Car03g01237 426 MobiDBLite consensus disorder prediction 72 94 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01237 Car07g00111 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01237 Car-Chr3:9568600 Car18g00550 Car-Chr18:5182713 3.79E-64 dispersed
Car03g01237 Car-Chr3:9568600 Car07g00111 Car-Chr7:713617 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01237 K05389 - csv:101220017 748.814