Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01238 ATGAAATGTTTAAAGATCTATTTTTGTCGAGCCCTTTTGGATACGGTGGGTTGGGTTGATTCAGAAACAGGCTTGGATGAGTACGAGTCTCTAGCCAGAGCTTTTGAGCTGTCCTCGGATTACTCGAATGAAATTTCGGGGACTCCCATGAATTCCTCCGCTTCCTTCTCCTCCTCTGATGCTGGAGCTGACGAGGATGATTCCCTCAAAGACAAGGATAAGCAGATCAAAGACATGGATGACGGCGGAGAGAGCTCCAAGACCGCGGCTAAATCAAAGAAGAAAGTAGAGAAGAAAGAGAGAGAGCCAAGAGTTGCTTTCATGACCAAGAGCGAGGTCGATCATCTTGAAGATGGGTATCGATGGAGAAAATATGGACAGAAGGCTGTCAAGAACAGCGCTTATCCTAGGAGCTATTACAGATGCACGACACAGAAATGTGGAGTGAAGAAACGGGTGGAGAGATCGTATGAAGATCCATCCATAGTAATTACGACGTACGAAGGGCAACACAATCACCCAATTCCCGCGACGTTAAGGGGGAACCTGTCGGCAGCGAGCGGCGCGTTTCCGCCGTCCATGTTGGCACCAATGCCGGTGGTCGGTGGCGTGAGGTATCTTCCACAGCTGATGAACAATACTTCCGTCAACAACAACCAGCCCATCGGAGGTGGCGACACCGTTTATTCACAAAGCAGCAGCTTCAACTATCCTTATAACGGACGGCAACAAGACTACGGGCTTCTGCAGGACATTTTACCGACGGCGCCGCCGTTCTTGAACCGACAACCATGA 795 49.69 MKCLKIYFCRALLDTVGWVDSETGLDEYESLARAFELSSDYSNEISGTPMNSSASFSSSDAGADEDDSLKDKDKQIKDMDDGGESSKTAAKSKKKVEKKEREPRVAFMTKSEVDHLEDGYRWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSYEDPSIVITTYEGQHNHPIPATLRGNLSAASGAFPPSMLAPMPVVGGVRYLPQLMNNTSVNNNQPIGGGDTVYSQSSSFNYPYNGRQQDYGLLQDILPTAPPFLNRQP 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9577419 9578542 + Carg15396-RA Car03g01238 145290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01238 264 MobiDBLite consensus disorder prediction 46 107 - -
Car03g01238 264 MobiDBLite consensus disorder prediction 46 62 - -
Car03g01238 264 MobiDBLite consensus disorder prediction 63 107 - -
Car03g01238 264 ProSiteProfiles WRKY domain profile. 111 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01238 264 Pfam WRKY DNA -binding domain 117 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01238 Car07g00110 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01238 Car-Chr3:9577419 Car19g00856 Car-Chr19:8938314 3.10E-57 dispersed
Car20g00226 Car-Chr20:1304429 Car03g01238 Car-Chr3:9577419 3.10E-43 wgd
Car03g01238 Car-Chr3:9577419 Car07g00110 Car-Chr7:709532 2.04E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3208 PF03106 WRKY 1.50E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01238 - - cmo:103484390 328.176