Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01249 ATGGCCTCCGCTTGTGCTTCTTCCGCCATCGCCGCGGTGGCGATTTCTTCTTCCAGGCAAGTTTTTTCTATTCCTCCGCCTTCCCAGAAGAATGGATGCCTCAAGGTTTCTAATTTCCTAACCGGCAAGAGGCTGAGGCTGAGAAAGTATACTGCTGCGGCTGTTGCTCCTCGATCAGCTCCGAGCCTGAGATGGAACCAGCAAGCAGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGCGCCGCCGGGATTTTCATCCCGGAATTCTTGACAAAGATCGGAATTCTTAACACCCCGTCGTGGTACACTGCCGGAGAATTGGAATACTTCACCGATACGACCACTCTGTTCATTGTGGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGATGGGCCGACATTCTGAAACCCGGTTGCGTCAATACCGACCCAATCTTCCCCAACAACAAGCTAACCGGAACCGACGTCGGGTACCCAGGTGGCCTGTGGTTCGACCCACTCGGTTGGGGTAGCGGGTCACCCGAAAAAATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGACTGGCTATGTTGGCGGTGATGGGCGCGTGGTTCCAACACATTTACACCGGCACCGGTCCCATCGACAACCTTTTCGCTCACCTTGCCGATCCCGGCCACGCCACTGTCTTCGCCGTGAGTTTTTAA 696 54.74 MASACASSAIAAVAISSSRQVFSIPPPSQKNGCLKVSNFLTGKRLRLRKYTAAAVAPRSAPSLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSF 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9642401 9643464 - Carg19256-RA Car03g01249 145301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01249 231 Pfam Chlorophyll A-B binding protein 61 203 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01249 Car-Chr3:9642401 Car18g00644 Car-Chr18:7714155 2.19E-110 dispersed
Car03g01249 Car-Chr3:9642401 Car10g00187 Car-Chr10:901163 3.54E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01249 K08908 - csv:101214055 385.185