Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01283 ATGGCTTTCAGGTCGAGCAGTCATACCAAAACGCGGGTGGGGAGATATGAGCTGGGGAGAACCCTTGGAGAGGGCAGCTTCGCGAAGGTTAAGTTCGCTCGGAATTGCGAGACAGGGGAGAACGTCGCCATTAAAATCCTCAACAAAGAGGACATTCTCAAGCACAAGATGATCGGGCAGATTAAACGTGAAATATCAACGATGAAACTCATTAGACATCCAAATGTCACTCGAATGTATGAGGTGATGGCTAGCAAAAGCAAGATATATATTGTTTTGGAATTTGTAACTGGTGGAGAACTATTCAACAAAATTGTGAGATACAGTGACTGGTTTTATCTCGTATCCATGCATGCAATTGCATGTAATGGAAGATTCAAAGAAGATGAAGCAAGAAAATATTTTCAGCAGCTTATAAATGCTGTGGATTATTGCCATAGCAGAGGCGTTTGTCATCGAGACCTAAAGCCAGAGAATTTATTATTGGATGCCAGTGGCGTTCTAAAAGTTTCAGATTTTGGATTGAGTGCTCTACCTCAACAAGTTCGAGACGATGGATTACTTCACACAACATGTGGAACACCCAATTATGTTGCTCCAGAGGTTATCAACAATAAAGGCTACTGTGGTGCAAAGGCGGACCTATGGTCATGTGGGGTTATCCTTTTTGTCCTCATGGCAGGCTATTTGCCATTTGAAGAAGCCAGTCTCGTGACATTGTATAAAAAGATATTCAAGGCCGACTTCAAATGTCCTCCATGGTTCTCCTCTAGTGCCAAGAAATTAATCAAGAGAATCCTCGATCCGAATCCGTTAACTAGAATTACAATTGCTGAGGTTCTTGAGAATGATTGGTTTAAGAAAGGATACAAGCCACCCACTTTCGAAAACGACGAAATCGTTCTTGATGACGTTGACGACATCTTTAATGAATCAGGGGTCACTCATAACCTTGTAGTCGAGAAGAGAGAAGAAGGGCTCGCATCCCCTGCATCACCTGTCACTATGAATGCATTCGAGCTCATCTCGAAATCTCAGGGTCTCAACCTTGCCACTCTGTTTGAGAAGCAAATGGGGCTATCTAAACGTGAAAAAAGTTTCACATCCCATTGTCCAGCAGATGAAATCCTTTCCAAGATAAAAAAGACAGCAGTTCCTATGGGTTTTGATGTGAAGATCAATAATTTCAAGATGAAGCTCCAAGGGGAAAAAACTGGACGCAAAGGTCATTTATCAGTTTCAACAGAGGTCGCTCCTTCGTTACATATGGTAGAGCTCCGCAAAGCTGGAGGGGATACTTTAGAATTTCACAAGTTCTATAATAACCTCTCAACTGGACTGAAAGATGTTGTATGGCGAACCGGAGACGAGACGGAGCAGGAAAGTAACGGTGTTGCAAATGCTTGA 1407 42.57 MAFRSSSHTKTRVGRYELGRTLGEGSFAKVKFARNCETGENVAIKILNKEDILKHKMIGQIKREISTMKLIRHPNVTRMYEVMASKSKIYIVLEFVTGGELFNKIVRYSDWFYLVSMHAIACNGRFKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDASGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYCGAKADLWSCGVILFVLMAGYLPFEEASLVTLYKKIFKADFKCPPWFSSSAKKLIKRILDPNPLTRITIAEVLENDWFKKGYKPPTFENDEIVLDDVDDIFNESGVTHNLVVEKREEGLASPASPVTMNAFELISKSQGLNLATLFEKQMGLSKREKSFTSHCPADEILSKIKKTAVPMGFDVKINNFKMKLQGEKTGRKGHLSVSTEVAPSLHMVELRKAGGDTLEFHKFYNNLSTGLKDVVWRTGDETEQESNGVANA 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9792705 9796094 + Carg19290-RA Car03g01283 145335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01283 468 ProSiteProfiles NAF domain profile. 331 355 IPR018451 GO:0007165
Car03g01283 468 ProSiteProfiles Protein kinase domain profile. 16 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01283 468 Pfam Protein kinase domain 16 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01283 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Car03g01283 468 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Car03g01283 468 Pfam NAF domain 333 392 IPR004041 GO:0007165
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01283 Car13g00407 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01283 Car-Chr3:9792705 Car12g00643 Car-Chr12:4319502 0 dispersed
Car13g00407 Car-Chr13:6590710 Car03g01283 Car-Chr3:9792705 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88750 PF00069 Pkinase 1.20E-70 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01283 - - csv:101214052 788.489