Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01304 ATGTATGAACTCCCCTGCCCCCAACAGCTTTACTTACCAACAGTTTCGTGTTTCAGGATCCATGTTGGATCTGAGCTCCTTCAAGCTGATTCTCAGCCTGGGGGGGATGCCATGTTGAAGCTGCTATGGCACCACTCCGATGCAATCATGTGTTGCTCTGTAAAAACCAACGCATCTGCTGTGTTCACCTTCGCTAACCAGGCTGGTTTGGACATGCTTGAAACCACTCTTGTTGGCCTGCAAGATATAATGCTCGACAAAATTCTCGATGAGGCAGGTCGGAAGATTCTCTGCACTGAGTTCCCCAAAATAATGCAGCAGGGATTCACAAATCTTCCATCTGGTATTTGCATATCGAGTATGGGCCGTCCCATTTCTTACGAGCAAGCCATTGCCTGGAAGGTTCTAAATGATGATGATTCCAATCACTGTCTAGCTTTCATGTTCATAAACTGGTCCTTTGTGTGA 468 46.58 MYELPCPQQLYLPTVSCFRIHVGSELLQADSQPGGDAMLKLLWHHSDAIMCCSVKTNASAVFTFANQAGLDMLETTLVGLQDIMLDKILDEAGRKILCTEFPKIMQQGFTNLPSGICISSMGRPISYEQAIAWKVLNDDDSNHCLAFMFINWSFV 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9971940 9972834 - Carg19311-RA Car03g01304 145356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01304 155 Pfam MEKHLA domain 16 154 IPR013978 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01304 Car-Chr3:9971940 Car08g00617 Car-Chr8:3969220 5.63E-62 dispersed
Car13g00385 Car-Chr13:6386083 Car03g01304 Car-Chr3:9971940 4.95E-77 wgd
Car03g01304 Car-Chr3:9971940 Car07g00056 Car-Chr7:356272 1.85E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01304 K09338 - csv:101210154 267.7