Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01305 ATGGCGCTTCTCATGCACAAAGAGATGGGTTCCAGCAAGTACGTACGGTATACACCCGAGCAAGTTGAGGCATTAGAGAGAGTTTATGCAGAATGTCCTAAGCCCAGTTCTCTCAAAAGGCAGCAGCTCATTAGAGAGTGCCCGATCCTTTCTAACATTGAGCCTAAACAGATCAAAGTTTGGTTTCAAAATCGCAGATGCCGTGAGAAGCAAAGGAAGGAATCTTCTCGGCTCCAGAGCGTTAATAGAAAGTTGTCAGCGATGAACAAATTGTTGATGGAGGAGAATGACCGCTTACAGAAGCAGGTGTCTCATTTGGTGTATGAGAACGGCTATGTCCGCCAGAAACTTAGTGCATCTGGGACGACTACAGACAATAGCTGTGAGTCTGTAGTCATGAGCGGTCAGCCTCAACAACAGCAAAACCCAAATCCTCAGCATCCCAATAGGGATGTCAACAACCCAGCTGGTCTTCTAGCGATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACAGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCCATCGGTATCGTTGCTGTTTCCCGCAACTGCAGCGGGGTGGCAGCACGAGCCTGTGGTCTTGTTAGTCTAGAGCCAACGAAGGTTGCAGAAATTCTCAAAGATCGCCTTTCCTGGTATCGTGACTGCCGATGTCTTAACGTTGTAAGTGTTATTCCTACGGGAAATGGGGGAACAATAGAGCTCATATATATGCAGACTTACGCTCCAACTACATTAGCAGCAGCACGCGACTTCTGGACTATGAGATATACAACAAGTTTAGAAGATGGCAGTGTAGTGGTTTGTGAGAGGTCATTGACTTCTTCTACTGGTGGCCCAGCAGGGCCTCCGCCATCTACTTTTGTTAGAGCTGAGATGCTTCCTAGTGGCTACTTAATACGAGCGTGCGAGGGTGATGGATCGATTATTCACATTGTCGATCACATTGATTTGGATGTTTGGAGTGTCCCTGAAGTTCTTAGGCCACTTTACGAGTCATCCAAGATCCTTGCTCAGAAAATGACAACTGCTGCATTGCGTCACGTTAGACAAATTGCTCAAGAGACTAATGGAGAGATTCAATACACTGGTGGACGCCAACCCGCTGTACTGCGGACGTTCAGTCAAAAACTTTGCAGGGGTTTCAACGACGCTGTTAATGGGTTTGCTGATGATGGTTGGTCGCCTATGGGCAGTGATGGTTTGGAGGATGTGACAATTGTCATAAATTCATCAGCAAACGTGTTTCCCGGATCCCAGTATAACACATCGATGTATCCCTCTTTTGGTGGAGGAGTGATGTGTGCAAAAGCGTCGATGTTACTTCAGGACGTTCCCCCTGCTTTGCTTGTTCGATTCCTGAGAGAGCATCGGTCTGAATGGGCTGATTATGGAGTTGATGCCTACTGTGCCGCAAGTTTAAAAGCCAGTCCATATGCTGTTCCATGTGCAAGGCCTGGTGGCTTCCCTAGCAGCCAGGTTATATTGCCTCTTGCTTCTACTGTGGAGCATGAGGAGTTTTTGGAGGTGGTTCGGCTGGAGGGCCTTGCATTCTCTCCCGATGACGTTGCTTTGGCTGGCCGAGATATGTACTTATTGCAGCTCTGTAGTGGGGTTGATGAAAATGCAGTTGGAGCTTGTGCTCAGCTTGTGTTTGCTCCTATAGATGAATCCTTTGCGGATGATGCTCCATTACTTCCTTCAGGATTTCGTGTCATCCCACTGGATCCGAAAACAGATGATCCTACTGCTGCTCGAACATTGGATTTGGCCTCTACTCTTGAAGTTGGTGCCAATGCTGCACGTTCTGCTGGTCAAACTGATTTGAGCAGCTACAATCTTCGGTCGGTCTTGACCATCGCTTTCCAGTTCACTTTTGAGAATCACTTACAGGAAAATGTGGCTGCAATGGCCCGACAATATGTCCGTAGTGTTGTCGGGTCCGTTCAAAGGGTTGCCATGGCCATTGCCCCATCTCGGTTGAGTTCCAATATGGGACTAAAGCCCCTTCCTGGTTCTCCTGAAGCTCTCACTTTGGCTCGATGGATTTGCCGAAGTTACAGGTATATACTACGTAATCCCCTAGTTTTCTTGGCACTGTAA 2157 48.08 MALLMHKEMGSSKYVRYTPEQVEALERVYAECPKPSSLKRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQSVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYVRQKLSASGTTTDNSCESVVMSGQPQQQQNPNPQHPNRDVNNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCLNVVSVIPTGNGGTIELIYMQTYAPTTLAAARDFWTMRYTTSLEDGSVVVCERSLTSSTGGPAGPPPSTFVRAEMLPSGYLIRACEGDGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKMTTAALRHVRQIAQETNGEIQYTGGRQPAVLRTFSQKLCRGFNDAVNGFADDGWSPMGSDGLEDVTIVINSSANVFPGSQYNTSMYPSFGGGVMCAKASMLLQDVPPALLVRFLREHRSEWADYGVDAYCAASLKASPYAVPCARPGGFPSSQVILPLASTVEHEEFLEVVRLEGLAFSPDDVALAGRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDDPTAARTLDLASTLEVGANAARSAGQTDLSSYNLRSVLTIAFQFTFENHLQENVAAMARQYVRSVVGSVQRVAMAIAPSRLSSNMGLKPLPGSPEALTLARWICRSYRYILRNPLVFLAL 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9972929 9976749 - Carg19312-RA Car03g01305 145357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01305 718 MobiDBLite consensus disorder prediction 118 151 - -
Car03g01305 718 ProSiteProfiles 'Homeobox' domain profile. 8 72 IPR001356 GO:0003677
Car03g01305 718 MobiDBLite consensus disorder prediction 118 154 - -
Car03g01305 718 Pfam Homeodomain 13 71 IPR001356 GO:0003677
Car03g01305 718 ProSiteProfiles START domain profile. 151 379 IPR002913 GO:0008289
Car03g01305 718 Coils Coil 78 102 - -
Car03g01305 718 Pfam START domain 161 369 IPR002913 GO:0008289
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01305 Car07g00056 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01305 Car-Chr3:9972929 Car08g00617 Car-Chr8:3969220 0 dispersed
Car07g00056 Car-Chr7:356272 Car03g01305 Car-Chr3:9972929 0 dispersed
Car13g00384 Car-Chr13:6380963 Car03g01305 Car-Chr3:9972929 6.23E-73 wgd
Car03g01305 Car-Chr3:9972929 Car07g00055 Car-Chr7:353870 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3213 PF01852 START 3.00E-49 CL0209 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01305 K09338 - csv:101210154 1322.38