Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01308 GCGGCTCTGATTGGTTATTTGGTGGCTGTTTTTCCAGATTATACACGAATCCTCTTCCTGTTAGCGATTGATTGTTATTGGAAACTTTTGAGCTTAGTTCTTTCTGCATGTATCGACCGCATTGAATGCAAAAGAAGGCTAAGGGACCTATTGCTCCTAAAGGATAATCGCTTCTGTGCGGATTGTCGCGCTTCAGACCCTAAATGGGCGTCAGCAAATATTGGAGTCTTTATATGCTTGAAATGTTGCGGCGTTCACAGAAGCCTTGGTGCACATATATCAAAGGTGTTATCAGTGACATTGGATGAATGGAATGATGATGAAATTGATGCCATGATAGAAATTGGAGGAAATTCTTCTGCAAATGCAATTTATGAAGCCTTTATTCCTGATGGATTTTCAAAACCTGGACCAGATGCCAGCCATGAACAACGTTCAAGATTTATTCGGTTAGAAATTATTAAGTAA 468 39.96 AALIGYLVAVFPDYTRILFLLAIDCYWKLLSLVLSACIDRIECKRRLRDLLLLKDNRFCADCRASDPKWASANIGVFICLKCCGVHRSLGAHISKVLSVTLDEWNDDEIDAMIEIGGNSSANAIYEAFIPDGFSKPGPDASHEQRSRFIRLEIIK 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9994085 9995742 + Carg19315-RA Car03g01308 145360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01308 155 Pfam Putative GTPase activating protein for Arf 45 150 IPR001164 GO:0005096
Car03g01308 155 ProSiteProfiles ARF GTPase-activating proteins domain profile. 44 155 IPR001164 GO:0005096
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01308 Car13g00382 CCT
Car03g01308 Car18g00478 CCT
Car03g01308 Car07g00053 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01308 Car-Chr3:9994085 Car04g01414 Car-Chr4:8209689 1.87E-43 dispersed
Car13g00382 Car-Chr13:6365479 Car03g01308 Car-Chr3:9994085 8.79E-56 wgd
Car18g00478 Car-Chr18:3183455 Car03g01308 Car-Chr3:9994085 1.57E-46 wgd
Car03g01308 Car-Chr3:9994085 Car07g00053 Car-Chr7:344749 2.11E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01308 K12486 - cmo:103503263 217.238