Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01309 ATGAACAGTTTTCGTTCTTCACAAAAACAAGAAGGTATGGTAGACTTTATTGGATTATTGAAGGTCAAAGTGATTAAAGGGACAAACTTAGCTATCAGGGATATGATGACAAGCGATCCTTATGTAGTCTTGACTCTTGGACGACAGACTGTCCAGACATGTGTAGTCGCGAGCAACTTGAACCCTGTGTGGAATGAGGAACTGACGCTATCTGTACCTCAATCTTTTGGATCCTTAAAGTTGTCTGCTGAAGAATTCCAGTTACTTTTCCTATTAGTTCTAGCTCCATGCTTACTGGTGCTGGTAATATACCTGTCATCTTGTTTGGATGTCGTGACATCGCCTCTCATTATGATGCATGATCACGTTAACATATCAAAATCTATTGCTATGGGGTTATTCACGGTTACGCTGCTTCTTGTCACCAAATTGCAGCAAGTATACGATTATGACACGTTTTCAGCAGACGACATAATGGGAGAAGCAGACATTGATCTCCAGCCCTTGATAACATCCGCAATGGCATTTGGAGATGCTGGATTGTTTTCAAATATGCAAATTGGAAAATGGCTGAAATCGCACGATAATGCTCTCATGAGCGATAGCACCGTTAATATTGTCGATGGGAAGGTGAAGCAAGAGATGACACTCAAGCTTCAGAATGTGGAATCAGGAGAACTAGATCTAGAGCTGGAATGGATGGCCTCTTGA 711 41.63 MNSFRSSQKQEGMVDFIGLLKVKVIKGTNLAIRDMMTSDPYVVLTLGRQTVQTCVVASNLNPVWNEELTLSVPQSFGSLKLSAEEFQLLFLLVLAPCLLVLVIYLSSCLDVVTSPLIMMHDHVNISKSIAMGLFTVTLLLVTKLQQVYDYDTFSADDIMGEADIDLQPLITSAMAFGDAGLFSNMQIGKWLKSHDNALMSDSTVNIVDGKVKQEMTLKLQNVESGELDLELEWMAS 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9996184 9998118 + Carg19316-RA Car03g01309 145361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01309 236 Pfam C2 domain 18 81 IPR000008 -
Car03g01309 236 Pfam C2 domain 146 172 IPR000008 -
Car03g01309 236 ProSiteProfiles C2 domain profile. 1 179 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01309 Car-Chr3:9996184 Car04g02140 Car-Chr4:17411312 5.60E-60 dispersed
Car03g01309 Car-Chr3:9996184 Car07g00052 Car-Chr7:343146 7.05E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01309 K12486 - csv:101218116 172.555