Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01314 ATGGGGAAGTTTCAAATCCGGAAATTCTTGATTCCTCTACTACTTCTGATAATTTCTGAGTATCTACTAACTGGAGACGCCAAAACCAATTCTCTTTTCATCAACTGTGGCTCAAGCTCAAACGAAACTGCTGATGGGCGGAAATGGATTGGCGACCTGACTTCCGAAGTGAACTTTTCCGTGGGTAGTCTTGGTGCTAATGTCAATTCCTCCACTGACACTTTAAACGGCGATTCAGTCTTTGAGCCGCTGTACAAAACTGCTCGGATATTTACTAATTCCCTGAACTATACTTTTAAAGGCGTTTGGGGTAATCATTTGGTTCGCCTCCATTTCTGCCCCTTTCCTTTTGAGAACTTCAATGTGAACGAGTCATCATTTTCTGTCTCAGCAAATGGTCTTAGACTGGTTTCAGAGTTCAGCGTTCCCAATGAGATTGCATATAAGAATATGGAGTTTCAGCGTTCTGGGGTCAATTCAAGTTCATTCTCTTTGATTAAAGAGTTCATTATTTCTGTCAATTCAGAAGCATTTGTTCTTGAGTTCTCCCCTTCTGGAGGATCATTTGGGTTCATTAATGCTATTGAAATCGTCCCCCTGGTGAATGAGCTTTTTGCAGGTTCGATTGGTAAGGTGGGTGGAAGTGCTGTTAGTTTGAATGTGAGTGAAAGGGGAGCTGAAACTATGTACAGATTGAATGTTGGAGGTTCGGTGATCAAGCCCACTCAAGATTCAAATCTTTGGAGAATGTGGGAAGTGGACTCGAGTTATATGATTACAGCAGATGCTGGGTCGGAGATACATAACAGTTCTAATGTAACGTATGCTTCCATGAATGACTCCATTGTAGCTCCTCTCCCTGTGTATGAAACAGCCAGAACGATGTCCGAGACTGAAGTGCTCGAGAAAAGATTCAACATGTCGTGGAAATTTGAAGTTCATCCTGGTTTCGAATATTTGATTAGATTACATTTCTGTGAGCTGCTGTATGACAAGGCAAGAGAGAGGGTTTTCAAGATTTACATAAACAATCGAACTGCAATTGAGAGTTTTGATGTGTTTGTACGAGCGGGGGGGATGAACAGAGCATATCATGTGGATTTTCTTGAACCAATATCGTCCAAAATCAACACCCTTTGGATTCAACTAGGCCCTGATACGGCTGCAGGTGCTGCCGGAACAGATGCTCTCTTGAATGGTCTGGAAATATTTAAGCTGAGTCAAAATGGGAATCTTGCGTTCATTGACAGGTTTAATGCCTTGGAAGAGTCCATGGGAAACTCGAAATCTCAAATTCTTTGGATAGGCATTGGAGCAGGTTTGGCATCTGTTGTTTTCCTTGCTGTCATTGTCATTCTCACCATCTATTTCTGCAGACACCGGAGGAGGAATTTTACTAAGAAGAACTCTTCTAAGTGGAGAGCAGGATCCAGTCATGGGGCCACTGTCACCAGCACCTTGGGGGGAGGGCAAAGTGTATTTGGGACCCTGCCATCTACCAGAGTTGGCAAATGGTTTACATTAGCAGAGATTCTTGCAGCAACAGATAACTTTGATGAAGCTCTGATGATCGGAGTTGGCGGTTTTGGTAAGGTCTACAGAGGGGAGATTGATGATGGTACTCTTGTGGCAATCAAGAGAGCAAACCCGCAGTCTCAGCAGGGACTTGCCGAGTTCGAGACCGAAATTGAAATGCTTTCTAAACTTAGGCATAGGCATCTGGTCTCCATGATCGGCTTTTGCGACGAGCAAAAGGAAATGATCTTGGTTTACGAATACATGGCGAATGGCACTTTAAGAAGCCATCTCTTTGGGAGTGATCTCCCACCTTTGACATGGAAGCAGCGATTGGAAGTGTGCATTGGTGCAGCCAGGGGACTCCATTACCTTCACACAGGAGCTGAGAGAGGAATAATCCACAGAGATGTGAAGACGACCAACATACTCTTGGATGAGAACTTTGTTGCAAAAATGTCTGATTTTGGTCTTTCAAAAACAGGTCCTGCTTTGGATCATACCCATGTTAGTACTGCAGTTAAGGGCAGCTTTGGCTACCTCGATCCAGAGTATTTCAGGCGCCAGCAGTTGAGTGAAAAATCTGATGTCTATTCTTTTGGTGTGGTATTGTTAGAAGTTGTTTGTGCACGAGCTGTTATAAACCCAACTTTGCCCAAGGATCAGATAAATCTTGCAGAATGGGCAATGAAATGGCAGCGCAAAAAGTTGCTGCACACCATCATAGACTCACATCTCAAAGACAAGTATTGCCCTGAGTCTCTTAAAACATTTGGAGAGATAGCAGAAAAATGCCTTGCTGATGAAGGCAAGATTCGTCCAACAATGGGGGAAGTTCTATGGCACCTAGAATTTGCTCTGCAACTCCATGATGCTTGGATCCGCACCAATGATGCTCAAAGTTCTTGCACAGTAAACTCAGAAGGAGCCCAAGCTGAGGAACAGAGGGGAGAAGTTGATCGGGAAGAGGAAAGCTCCAGCTTGAAAGCTTCAACTCCAACTGATCACTTATCCTAA 2532 43.84 MGKFQIRKFLIPLLLLIISEYLLTGDAKTNSLFINCGSSSNETADGRKWIGDLTSEVNFSVGSLGANVNSSTDTLNGDSVFEPLYKTARIFTNSLNYTFKGVWGNHLVRLHFCPFPFENFNVNESSFSVSANGLRLVSEFSVPNEIAYKNMEFQRSGVNSSSFSLIKEFIISVNSEAFVLEFSPSGGSFGFINAIEIVPLVNELFAGSIGKVGGSAVSLNVSERGAETMYRLNVGGSVIKPTQDSNLWRMWEVDSSYMITADAGSEIHNSSNVTYASMNDSIVAPLPVYETARTMSETEVLEKRFNMSWKFEVHPGFEYLIRLHFCELLYDKARERVFKIYINNRTAIESFDVFVRAGGMNRAYHVDFLEPISSKINTLWIQLGPDTAAGAAGTDALLNGLEIFKLSQNGNLAFIDRFNALEESMGNSKSQILWIGIGAGLASVVFLAVIVILTIYFCRHRRRNFTKKNSSKWRAGSSHGATVTSTLGGGQSVFGTLPSTRVGKWFTLAEILAATDNFDEALMIGVGGFGKVYRGEIDDGTLVAIKRANPQSQQGLAEFETEIEMLSKLRHRHLVSMIGFCDEQKEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPALDHTHVSTAVKGSFGYLDPEYFRRQQLSEKSDVYSFGVVLLEVVCARAVINPTLPKDQINLAEWAMKWQRKKLLHTIIDSHLKDKYCPESLKTFGEIAEKCLADEGKIRPTMGEVLWHLEFALQLHDAWIRTNDAQSSCTVNSEGAQAEEQRGEVDREEESSSLKASTPTDHLS 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10021723 10024254 + Carg19321-RA Car03g01314 145366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01314 843 MobiDBLite consensus disorder prediction 818 834 - -
Car03g01314 843 ProSiteProfiles Protein kinase domain profile. 518 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01314 843 Pfam Protein tyrosine and serine/threonine kinase 523 785 IPR001245 GO:0004672|GO:0006468
Car03g01314 843 MobiDBLite consensus disorder prediction 809 843 - -
Car03g01314 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Car03g01314 843 Pfam Malectin-like domain 34 405 IPR024788 -
Car03g01314 843 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01314 Car-Chr3:10021723 Car09g00807 Car-Chr9:4886675 0 dispersed
Car16g00317 Car-Chr16:1950537 Car03g01314 Car-Chr3:10021723 7.00E-76 dispersed
Car03g01314 Car-Chr3:10021723 Car07g00048 Car-Chr7:325795 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88751 PF12819 Malectin_like 6.10E-32 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01314 - - bhj:120073088 1540.78