Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01320 ATGGTCGGAGGCTTTGAAGTGGGTGCTGTTCCCTACAACCCTGACGGTTGGGGTCCGCCGGACTCTACCGATTCTCTCGTCGCTTCCTCCAACCTCCCTCTCAATGTTCCCTTCGCTCCCTTCTCTCGCTCCGATAGGCTTGGCCGGATCGCTGATTGGACCCGAACTATGAATAACCCTGGTCGCCCCAAGACTGCTTCCGATTCCGTCTTCGACTTCACCAATGACGATTCCTTCCCAGCCAATGCGGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGTCCCAAATTTGGCCCTAAATGGCGATTCAACCAACAAAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTGGAAGCTCGGAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGATCGTCTTTACAACCTCAATAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTGGAAATTCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACGTTCTCGAAGCTCTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGTGCATACGACCGAATCACTCCCAAGAACGAGCGCCGCCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACAGACGACCCTGTCATTCGTCGTCTTGCAAATGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTTCCCTTATGTGCGCAACCAGATCGGTTTACTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTCCCGTCCACGAGACATCTCAGGAACCCTTGCCAGAAGCGAAGGACGATATCAATTCAGCTTACTCACTGAGTGTTGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTGGTTAGAGACGGAAGTAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTCGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAGCTCGATGATGACATGTATCTTGTGGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAAAGATCATTTTTGACTCTGAATGCTCTTAATGAATTTGATCCCAAATATTCTGGTGTCGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTGTTGGCCACTGAGTTGAAGAACAATGCTAATAAATTGGCAAAATGGACAGCTCAAGCTCTGTTGGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGCGATCACTTCAACCATGTCATCTTAGCCGTTGTTGGATATAAACCTAAGGATTTTGCAGCTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTTAAGTCTATCGTGGATTTGTGCATGAAATTGAACGAAGGCAAGTATGTTTTGGTCAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGGAGAAGATGAAAATGGTGTCACTGTTAATGCGGGGACGGATGATGCAGAAGAGAAGCTTAAGTCACAGCAGCATTCATTCGACTTGCTTGAGGAAGTTAAAACTCTAACCTTTTGTGTCTTTTTGTTCCCTTTCTTTTATGAGATTATCATTTTGGTATTGGTTTTGGTTTTGGATTCCTGCAAGCATAATACACATTGCTCGAGTAACTTTCAGTTGTTAAAACGTTTTGCTAGCTATAGCTGGTTATGCTATCCTGGAAATTTTGAACATGAGTTCTTTCCATCAGCTCTATTCGCTATGCAGCATTCACCGGAGAAGATGCTTGCTAGTCTTGGAGAATTGCGCCGAACGTGGAAATGGCAATTGAAGAAATGTCCACAAAAGCAAAACAAGAAATGCCCAAAATTGGAGATGACGACTGAATTCACGGGAGTCACAGATAAGCTGGATGAGAATCTGTACATAAGACTGATGCTAAACTCCGCCAAGGGGAAAGATGGGCTGAAAACAGGGAAAGCTTCATTGGGGGCGCTGTTTCTAGGGCCAGCAAACACGCTCGTGGAGATTATCAATAAGCACATACCCAGTTTGAAATTGCAGAAGGAGGATTGCTCTGAAATGAGTTGGATTGAGTCGGCTCTGTTTTGGGCAAATTTCCCAAAAGGGTCAACCCCAGAAGTTCTGCTGGACAGAGCAGTCCGACCCAATACTTTCCTGAAGCGGAAATCGGACTACGTGAGGGAACCCATTACAGAGTCGGGTGCCCAGAAGCTGTTTTCCTTAATGTCTGAAACACTTCCAGAATTGGGTGTGAAGGCCGAGGATTGTCTAGAAATGAGCTGGATCGAGTCTATTCCGTCTACACACAATTTCTCCAGTGCTTCCAATCCAACTCCGACACCTCTAATGGAGTCTCCGACATAG 2550 47.25 MVGGFEVGAVPYNPDGWGPPDSTDSLVASSNLPLNVPFAPFSRSDRLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSSLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLPVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGSKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGVTVNAGTDDAEEKLKSQQHSFDLLEEVKTLTFCVFLFPFFYEIIILVLVLVLDSCKHNTHCSSNFQLLKRFASYSWLCYPGNFEHEFFPSALFAMQHSPEKMLASLGELRRTWKWQLKKCPQKQNKKCPKLEMTTEFTGVTDKLDENLYIRLMLNSAKGKDGLKTGKASLGALFLGPANTLVEIINKHIPSLKLQKEDCSEMSWIESALFWANFPKGSTPEVLLDRAVRPNTFLKRKSDYVREPITESGAQKLFSLMSETLPELGVKAEDCLEMSWIESIPSTHNFSSASNPTPTPLMESPT 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10039578 10049341 - Carg19327-RA Car03g01320 145372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01320 849 MobiDBLite consensus disorder prediction 830 849 - -
Car03g01320 849 MobiDBLite consensus disorder prediction 114 134 - -
Car03g01320 849 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Car03g01320 849 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Car03g01320 849 Coils Coil 118 138 - -
Car03g01320 849 MobiDBLite consensus disorder prediction 88 134 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01320 Car18g00489 CCT
Car03g01320 Car13g00361 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01320 Car-Chr3:10039578 Car13g00361 Car-Chr13:6239647 1.70E-19 dispersed
Car03g01319 Car-Chr3:10037180 Car03g01320 Car-Chr3:10039578 2.04E-12 tandem
Car03g01320 Car-Chr3:10039578 Car03g01321 Car-Chr3:10050226 2.16E-62 tandem
Car03g01320 Car-Chr3:10039578 Car07g00045 Car-Chr7:303594 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01320 K03251 - csv:101208923 1084.32