Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01325 ATGGATTCAGCAAGGAGTTGGTTTCAGAAGTTCCAATATAAAGAAAAGAAGGAGACTGTAAGTGAGAATGAGGTTCAAGATGTACCATCAAGTGCGACAAAACAGAAAGTGGAGGTTGCCAAGCAATATATCGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGGAGGCTTGCTGATGCCGATGCTTCTGAGGAAGACCAAATAAACGTTCTTAAATATTTAGAACAGAAGGAGACTGAGTACATGCGTCTTCGTAGACATAAAATGGGTGTTGATGACTTTGAACTTTTGACAATTATAGGAAGGGGGGCATTTGGGGAGGTTAGACTTTGTAGAGAAAAAGCCACAGGTCACGTGTATGCAATGAAGAAGCTTAAGAAGTCTGAGATGCTTCGCAGGGGGCAGGTGGAACATGTCAAAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTTCAGGATGAGGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACTCTGTTAATGCGCAAGGACATTTTGACGGAGGATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGATAATTTACTGCTTGATCGTTATGGGCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCACCGAGCAAGAAAATATAGTGGGGAACAATGTCAGATCTCCTGATAATCAAAATAGTGTGTCGAAACGAACACAACAAGAGCAATTGTTACATTGGCAAAAGAACAGACGAACATTGGCTTATTCTGCTGTTGGAACGCCGGACTATATTGCCCCAGAAGTGTTATTGAGGAAAGGATATGGAATTGAGTGCGACTGGTGGTCCCTTGGTGCAATTATGTACGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGATGATCCAATGTCTACTTGTAGAAAGATCATTAACTGGAGAACTCATTTGAGATTCCCAAAAGAAGCAAAACTTTCCTTTGAGGCCAAAGATCTTATTTGCAAACTTTTATGCAATGTTGAGCAAAGAATTGGAACCAAAGGAGCTATAGAAATTAAGGCGCATCCATGGTTTAAAGGGATACAATGGGATAAATTATATCAAATGGAAGCTGTTATCATCCCAGAGATCCATGATGAGTTAGACACTCGAAATTTTGAGAAGTATGAAGAGCTGGGTGTGCCAGGTCAAACTCCATCAAAGTCGGGTCCTTTGAGAAAGGCAATTGTTCTTTCGATGTGTTGGAAACAGAAGCTTTCACCCAAGGATGTAAACTTTGTTGGCTATACGTACAAGAATTTTGAAATTGTCAACGAACACCACTTGTCTGGCATTACTGAGACGAGGAAAAAGCTTAACAAGACCAAGAGACCATCTGTTACGACTCTATTTGCCACAGCAGATTCTTCAGAGCAGCCTGTTCAAAGAAGTTTTCCTAATCATTTGCCAACCCATCTCGAAGTCTCGGAAAGCCCCGATCCATCACCTCGTTCAACTGGATCACTGCAACAGCAGCAGAAGCGATGGGGAAAATGA 1677 41.14 MDSARSWFQKFQYKEKKETVSENEVQDVPSSATKQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADASEEDQINVLKYLEQKETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDEDFLYLIMQYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLTEQENIVGNNVRSPDNQNSVSKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGIECDWWSLGAIMYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPKEAKLSFEAKDLICKLLCNVEQRIGTKGAIEIKAHPWFKGIQWDKLYQMEAVIIPEIHDELDTRNFEKYEELGVPGQTPSKSGPLRKAIVLSMCWKQKLSPKDVNFVGYTYKNFEIVNEHHLSGITETRKKLNKTKRPSVTTLFATADSSEQPVQRSFPNHLPTHLEVSESPDPSPRSTGSLQQQQKRWGK 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10060765 10066760 - Carg19332-RA Car03g01325 145377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01325 558 Pfam Protein kinase domain 107 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01325 558 MobiDBLite consensus disorder prediction 512 531 - -
Car03g01325 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Car03g01325 558 ProSiteProfiles AGC-kinase C-terminal domain profile. 406 488 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car03g01325 558 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Car03g01325 558 ProSiteProfiles Protein kinase domain profile. 106 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01325 558 MobiDBLite consensus disorder prediction 538 558 - -
Car03g01325 558 MobiDBLite consensus disorder prediction 512 558 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01325 Car-Chr3:10060765 Car08g00953 Car-Chr8:6369726 0 dispersed
Car03g01325 Car-Chr3:10060765 Car17g00140 Car-Chr17:866008 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88752 PF00069 Pkinase 9.50E-64 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01325 K08790 - csv:101208438 1019.61