Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01332 ATGGATATCATTCACCGTGCACGTCTACTATGCGCTGTTGTATGTTTTGGGATGTTTATATGCGCATCTTGTCTGGACGAATTCGGGGATTCAACAGCCGTGTACATTGTAACCCTCAAGGAACCTCCTCCTACTACTCATTACTATGGTCAGCTTAGGCAGAATACCACTTCTTTTAGGCTCGGTGCTTCTGGTGGATTAAGCATCCACAAACCAAGAAACATATCAAGAAAGCATCGAAGATATAGATCTTATATAGCTCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAGAAATACTTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTCGCTGTGCTTGTTACTGAAGAACAGGCTAATAAACTTTCAAAGAGAAAGGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGGCTTCCTCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAAGGTGCTGGAGCTGGGATTGTGATAGGGTTCGTTGACACTGGCATTGACCCTTCTCACCCCAGCTTTGCTGATGATTTGAGTGATAAACCATTTCCAGTTCCACCCCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGGTCATGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCTTCACCATTTGATGGTGATGGGCATGGCACGCACACAGCTTCCATTGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCGCACATTGCTGTTTATAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCGGATGTTGTTGCTGCAGTCGATCAGGCTGCTCAGGATGGGGTGGATATAATAAGTTTATCAATCACACCGAACAGGCGTCCCCCGGGTATTGCAACGTTTTTTAATCCCATAGATATGGCATTGCTCTCTGCTGTAAAGGCTGGTATATTCGTTGTGCAAGCAGCTGGTAACACTGGTCCAGCACCTAAGAGCATGTCTTCCTTCAGTCCATGGATCTTCACTGTTGGGGCTGCTTCTCACGACAGAAGCTATGCTAACTCGATAAGCCTTGGCAATAACGTCACCATCCCGGGAGTCGGACTTGCTCCTGGAACTTATAATGGCACAAAGAACAAACTAATTGCTGCAATACACGCTTTGAACAATGGGACAAACGTGTCGGCGGACATGTACGTGGGCGAATGCCAAGACTCCAGTAACTATGATCAGGATCTGATCCAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTGGGGCTTTCCACAGTTAAACAAGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATACCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATATTACAATTCTTCACTGGAAGTAGATGGATTAACAAAGAGAATTTCAAAATTTGGAGCTGTTGCTAGCATATGTGGGGGATTGAAGGCAAATTTTAGCTCTTCTGCCCCACAAATCATGTACTATTCTGCTAGAGGACCAGACCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTCGGTGAAAGCTTTGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGTCTAGCCTCACTGGTAAAGCAGAAGTACTCCAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCCACAACTGCTTCTCTTTACGACAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTATGCTAATCCCGAACAGAACCAGTCTCCAGCTACGCCTTTTGATATGGGAAGTGGTTTTGTGAATGCAACGGCAGCTCTCGACCCAGGGTTGATCTTTGATTCCAGTTACGATGATTATATGTCGTTTCTTTGTGGAATCAATGGATCATCCCCTGTGGTATTCAACTACACAGGCCAGAACTGCGGGCTTTACAATTCCAGTATCAGTGGAGCTGATTTGAACTTGCCCTCTGTGACGATAGCAAAACTTAACCAGTCAAGAGTAGTGCAACGAACCGTGACCAACATAGCTGGACCTGAGATTTATAATGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTACAATCGACAGCGGCATGAAACAAGAGCTAACCATATTCTTGAACGCGACAATGAACAGCTCGGTTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTGTTTCAGTAATTTTGAAGATCTCATATAACAACACTACTAATTGA 2535 44.62 MDIIHRARLLCAVVCFGMFICASCLDEFGDSTAVYIVTLKEPPPTTHYYGQLRQNTTSFRLGASGGLSIHKPRNISRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEEQANKLSKRKEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFEGAGAGIVIGFVDTGIDPSHPSFADDLSDKPFPVPPHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNVTIPGVGLAPGTYNGTKNKLIAAIHALNNGTNVSADMYVGECQDSSNYDQDLIQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKRISKFGAVASICGGLKANFSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGESFAMMSGTSMAAPHIAGLASLVKQKYSSLSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALDPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSISGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEIYNVGWSAPYGISLKVSPTRFTIDSGMKQELTIFLNATMNSSVASFGRIGLFGSAGHIINIPVSVILKISYNNTTN 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10088097 10092465 + Carg19339-RA Car03g01332 145384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01332 844 Pfam Peptidase inhibitor I9 34 146 IPR010259 -
Car03g01332 844 Pfam Subtilase family 171 664 IPR000209 GO:0006508|GO:0008236
Car03g01332 844 Pfam Fibronectin type-III domain 740 833 IPR041469 -
Car03g01332 844 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Car03g01332 844 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Car03g01332 844 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01332 Car18g00527 CCT
Car03g01332 Car07g00037 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01332 Car-Chr3:10088097 Car05g00664 Car-Chr5:4131628 0 dispersed
Car03g01332 Car-Chr3:10088097 Car07g00037 Car-Chr7:256504 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01332 - - bhj:120074717 1571.99