Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01340 ATGGGGAAGAAGAAGAAGAGGGTGTCGTCTAAGGTATGGTGCTATTATTGCGACAGAGAATTCGACGACGAGAAGATATTGGTGCAGCATCAGAAGGCCAAACACTTCAAGTGCCATGTCTGTCACAAGAAGCTTTCTACTGCTGGTGGTATGGTCATCCACGTTCTTCAGGTTCACAAGGAGTCGGTCACCAAAGTTCCTAATGCAAAACCAGGCAGAGAATCGACAGATATTGAAATATATGGAATGCAAGGAATTCCTCCCGATGTCTTGGCAGCACACTATGGCGAGGACGAAGAAGAGTCCTTGTCAAAGGTGGCCAAAGTGGAGATGCCACCGACTCAGATGGTTGGAGGTGTGGTGCCCGGATCGCTGGGCATTGTATACCCTCCTCAGCCAGGTTTAGCTGCAATTCAACCTATTTATCCTTCGACTGGACAAGCACAGCCTACTGCCTGGCCGGTTCCACCTCGTCCCCAACCTTGGTTCCCTCCAAATTCAGCCGTTTCAATTTCGGCTCCTGCCCCATTGGGCTATGCTCAGCAGCCACTATTTCCTGTGCAGACTGCAAGGCCCCCACTTCCAGTATCATCAACTCCTATGCTCCAGTCTTCACAAATAACACATCCTGGATTGACTTCAACCACACCTTCAGTTTCTGTATCTCAGCCGTTGTTCCCTGTTGTTAATAATAGCCTCGGACCTACTCAAAGCTCTCCTTTTCCTTCATCTACACTTTCAACAAGCATTCCTTTGACCTCAGCAGCAGATATCAAGGGCTCAGTGACACATCTGGGCACTAACTCCTTTTCTACTATCAGCAATCAGGTTCCAAATGTTCCAGGTGCAACTAATTACTTATATGCGGGTGCCTTATCCGCATTTAATGTTGTAGGTGGAATATTAAGCAATTCACACTCCTATGCCTCGGGACCAAATACGGGTGGTCCTTCTATCGGACCACCTCCTGTAATTGCAAATAAGGCTCCTACTCAGCCATCAACGAACGAAGTATATTTGGTTTGGGATGATGAGGCGATGTCTATGGAGGAAAGAAGAATGTCCTTAATCAAGTATCAGGTGCATGATGAAACTAGCCAGGTAAGTTATACTACAACTTAA 1122 46.97 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEDEEESLSKVAKVEMPPTQMVGGVVPGSLGIVYPPQPGLAAIQPIYPSTGQAQPTAWPVPPRPQPWFPPNSAVSISAPAPLGYAQQPLFPVQTARPPLPVSSTPMLQSSQITHPGLTSTTPSVSVSQPLFPVVNNSLGPTQSSPFPSSTLSTSIPLTSAADIKGSVTHLGTNSFSTISNQVPNVPGATNYLYAGALSAFNVVGGILSNSHSYASGPNTGGPSIGPPPVIANKAPTQPSTNEVYLVWDDEAMSMEERRMSLIKYQVHDETSQVSYTTT 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10154293 10159883 - Carg26328-RA Car03g01340 145392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01340 373 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Car03g01340 373 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Car03g01340 373 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01340 Car-Chr3:10154293 Car07g00033 Car-Chr7:205106 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3216 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01340 - - cmo:103484275 620.542