Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01373 ATGGATGCGAGTTCTATAGATGAAAGCAGGGGCAGCGACTCCACCTCCATTTCTCCCGTCACTCCATTACTCTTCCACTCATCCCCAGCGCCTGGGATGCCCCATGAGGCGGAGTCTCGGAAGCTTCCGTCTTCCCGTTTCAAAGGAGTGGTCCCTCAGCCCAATGGGCGATGGGGGGCCCAGATCTACGAGAAGCATCAAAGAGTCTGGCTGGGGACATTCAACCAAGAACACCACGCTGCCAACGCCTACGACATCGCTGCCCTGCGGTTCCGTGGCCGCGACGCCGTCACGAACTTTAAATCCCTGGACGACGAGGATGATAATGATGCGATGGAGGGCGAGTTTCTGAACTCCCACTCCAAGCTGGAGATCGTGGACATGCTCCGGAAACACACGTACAATGAGGAGCTGGAGCAGAGCAAGCGGCAGCGTGGGGCCATAGCGGCGGCTAATACGGCTGTCCACCATTCGGGGGTTGATTCGAAGAGGGAAGTGTTGTTTGAGAAAACGGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAAGAATTTCCCGATGGGGGAGGGGGTGGGTTCAGGGAAAGGAATGCTTCTGAACTTGGAGGATATGGGAGGGAAAGTTTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAGAGCTATGTGTTGACTAAAGGGTGGAGCCGGTTCGTGAAAGAGAAGAGTCTCCGAGCCGGGGATGTGGTTCGGTTCCTCCGCTCCACCGGGGCGGATAAGCAGCTTTACATCGATGGAAAGGCGATAAGTGAAGGGGGGGTGAAGGCGGTTCATGTGGTCAAGCTTTTTGGAGTCAATATTCTGGAAGTGCCGCTGCCGGTGGGTCGTTGCGGCGGGGAGCCAAAGAACCAAGGGGTATTATTGGAATTGCCACCTTCCAAGAAGCAGAGAATAATCAAAGCTTTGTAA 975 55.49 MDASSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDNDAMEGEFLNSHSKLEIVDMLRKHTYNEELEQSKRQRGAIAAANTAVHHSGVDSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAVHVVKLFGVNILEVPLPVGRCGGEPKNQGVLLELPPSKKQRIIKAL 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10390971 10391945 - Carg24633-RA Car03g01373 145425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01373 324 ProSiteProfiles B3 DNA-binding domain profile. 168 270 IPR003340 GO:0003677
Car03g01373 324 Pfam B3 DNA binding domain 168 262 IPR003340 GO:0003677
Car03g01373 324 ProSiteProfiles AP2/ERF domain profile. 46 101 IPR001471 GO:0003700|GO:0006355
Car03g01373 324 MobiDBLite consensus disorder prediction 1 23 - -
Car03g01373 324 Pfam AP2 domain 46 93 IPR001471 GO:0003700|GO:0006355
Car03g01373 324 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01373 Car-Chr3:10390971 Car04g01569 Car-Chr4:9094245 7.92E-128 dispersed
Car03g01373 Car-Chr3:10390971 Car04g01958 Car-Chr4:13539041 2.00E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3221 PF02362 B3 2.20E-27 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01373 K09287 - csv:101206328 484.567