Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00035 ATGGGCGACCCCGACAACAGTAATAATAATAGCAATAGCAATAGCAATAGCAATAGCACTAGCAATAGCAATGCCAGGAGTGGTCCGGCGGCGGAGCACTGTGTGGACATAGTTCATCCCGTGGTTCCCCCTCCGCACAGAAGCGGGTTGCAGAGGCTAGGCAACCGGCTGAAGGAGACGTTTTTCCCCGATGACCCTCTTCGGCAGTTCAAAGGGCAGTCTCCGGCGAGGAAATGGGTGATCGGGGCTCAGTATATTTTCCCGATTCTTGAATGGGGGCCTCATTATAATCTCAGGCTCTTCAAATCTGATGTTGTTGCTGGGCTCACCATTGCAAGCTTGGCCATCCCTCAGGGTATTAGCTATGCTAAGCTTGCTAATCTGCCTCCCATTGTTGGGCTTTATTCAAGCTTTGTTCCACCACTGGTGTATGCGGTTCTTGGAAGCTCAAGAGACCTGGCGGTTGGGCCTGTATCAATAGCATCGCTAATACTGGGATCCATGCTGAGGCAAGAAGTGTCCCCACTCAAAGATCCCATACTCTTTCTCCAACTCGCCTTCACCTCCACCTTCTTCGCCGGCCTCTTCCAGGCCTCCCTCGGCTTCCTAAGACTTGGGTTCATAATCGATTTTCTGTCGAAGGCGACTTTGATTGGGTTCATGGCGGGGGCGGCCATTATTGTGTCTCTGCAGCAGCTTAAAGGCTTGCTTGGAATTACCCATTTCACCAAACAGATGGGTTTGCTTCCTGTTTTGACCTCAGTTTTTCACCACACTCACGAGAGCATAAGAAAGCCGAAGCTGTTCTGGATATCAGCCGGAGCTCCTCTAGTGTCTGTCATTGTTTCAACCATATTGGTGTTTGCATTCAAGGCCGATGCTCATGGCATCAGCACAATTGGGAAATTGCAACAAGGCTTGAACCCACCTTCATGGAACATGCTCCGTTTCCAACACTCCCATCTCCCCCTTGTTATTAAGACTGGCCTCGTCACCGGCATCATCTCGCTCACGGAAGGAATAGCCGTGGGTCGGACATTTGCAGCTATAAAAGACTACCGCGTCGACGGCAACAAGGAAATGATCGCCATCGGCCTCATGAACCTCCTCGGCTCTTTCACTTCTTGCTATGTCACCACAGGCGCCTTCTCCAGGTCCGCGGTGAACCATAACGCGGGGGCCAAAACCGCCGTGTCTAACATCATAATGTCCGTCACAATAATGGTCACGCTCCTGTTTCTGATGCCTCTGTTTCAGTACACGCCCAATCTGGTGCTGGCCGCCATCATCGTCACCGCCGTTATTGGGCTTATCGACGTCCCCGCCGCCTACGCCATTTGGAAGGTGGATAAGTTCGACTTTGTTGTCATGCTCTGTGCCTTCTTCGGCGTCATTCTCATCTCTGTTCAACACGGTCTCGCCATTGCTGTTGGCATATCCATTTTCAAAATCATCCTGCAAATCACGAGGCCAAAAACAGTGATGTTGGGGAACATACCTGGAACAGACATATACAGAAACCTTCACCATTACAAGGATGCAGTGAGCGTCCGAGGTTTCCTCATCTTGGGCATTGAAGCTCCAATCAACTTTGCCAACGCTACATATCTCAACGAAAGGATTTTGAGATGGATAGAAGAGTATGAAGCTGAGGATGACGTGAAGAAGGAGGGCGGTGGCCTGCAGTTTGTTGTTTTAGAATTGTCGGCCGTGAGTGGCATAGACACCAGTGGAGTCCTGCTCTTCAAGGATCTAAGAAGAGCATTGGAAAAGAAGGATGTCGAGGCAAGTACCTTCACTGCTTCATCTCGGTCACTACTTTTGCTTGTGTTGGTGAATCCATTGGGTGAAGTGTTGGAAAAGTTGCAAAAAGCAGATGAAAATGGAGAGATTTTGAGGCCAAATAATGTGTACTTGACGGTGGGAGAGGCGGTTGCTTCGCTATCAGCAACAGTGAAGGGGCAATGCTCAACCACTATGATGAAGCTATGGCGCAGGACTGCCGGAGCAATCAAGGACCGAAACAGCATTTGGCTGGCCACCCTTTCACCCCGCACGCCCTACCGCCACCCCGACCTCGAGGCTGCCATCATCCGAGCCACCAGCCATGACGGTGCTAAAATAGACTACACCAATGCCCGCCGCGTCTTTCAATGGATCCGAACCTCTCCCGTCTACCTCAAGCCTCTCGCCTTGGGCCTCTCCTCCCGTATGGAGAAGACACGAAGCTGGGTTGTCGCTCTAAAGGGTCTTATGCTCATCCATGGCGTTTTTTGTTGCCAAATTCCCTCCGTCCAGCGCATGGGCCGTCTGCCTTTCGATCTCTCTGCCTTCGAAGATGCCCATTCCAATTCATCCAAGACTTGGGGTTATAACGCCTTCGTCAGAAGCTATTACGCATATCTGGATCAGAAGTCCTCGCTTATTTCTTCTGAAGCCAAGAATGCGAACAAAGGGTTGAAGCCCCTATTGTTGGATGAGTTGATTAAGCTTCAAACTTGGCAGTCCATGTTGGATATGTTGCTTCAAGTTCGACCCTTGGATGAGGATATGAAGGGGGGCTTAGTTTTGGAGGCCATGAACAATCTCATCTTTGAGATTTTTGACGTTTACAGCCAAATCTGCAACGGAATTGCTCAAGTTCTGTTGAACATTTACGAGACACCAGCCAAACCCGAAGCATCATTGGCACTTCAAGTTGTCAAAAAAGCAGCAACTCACGTAGAAGATTTGACTCAATACTTTGAGATATGTAGAGAAATGGGTGTTTTGAATGCATCTCAGACCCTAAAATTGGAGAAGATCCCAGAAGAAGACATCAAAGATCTTGAGAAAATTATCAATGGAAGCGTTAATTTTAATGGGAAAGATAATGGAGGAGAGATGAGGAGTGAGCTTGGAAATGGATCAAAGAGGGGGTTGAAGACAGTGATTACAGACAAATGGGAGAGATTTGATGCAGATTGTTGTTCATCAACCACTTTACAAGTCCCTTTTGCAAGCTGTTCTTCTTCCCATTTGAGCCTTGTTTCTAAACCAGTACATAAACAAGACTTACCTGACTTGATCACTTTCTAG 3078 48.73 MGDPDNSNNNSNSNSNSNSTSNSNARSGPAAEHCVDIVHPVVPPPHRSGLQRLGNRLKETFFPDDPLRQFKGQSPARKWVIGAQYIFPILEWGPHYNLRLFKSDVVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQEVSPLKDPILFLQLAFTSTFFAGLFQASLGFLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKGLLGITHFTKQMGLLPVLTSVFHHTHESIRKPKLFWISAGAPLVSVIVSTILVFAFKADAHGISTIGKLQQGLNPPSWNMLRFQHSHLPLVIKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNLLGSFTSCYVTTGAFSRSAVNHNAGAKTAVSNIIMSVTIMVTLLFLMPLFQYTPNLVLAAIIVTAVIGLIDVPAAYAIWKVDKFDFVVMLCAFFGVILISVQHGLAIAVGISIFKIILQITRPKTVMLGNIPGTDIYRNLHHYKDAVSVRGFLILGIEAPINFANATYLNERILRWIEEYEAEDDVKKEGGGLQFVVLELSAVSGIDTSGVLLFKDLRRALEKKDVEASTFTASSRSLLLLVLVNPLGEVLEKLQKADENGEILRPNNVYLTVGEAVASLSATVKGQCSTTMMKLWRRTAGAIKDRNSIWLATLSPRTPYRHPDLEAAIIRATSHDGAKIDYTNARRVFQWIRTSPVYLKPLALGLSSRMEKTRSWVVALKGLMLIHGVFCCQIPSVQRMGRLPFDLSAFEDAHSNSSKTWGYNAFVRSYYAYLDQKSSLISSEAKNANKGLKPLLLDELIKLQTWQSMLDMLLQVRPLDEDMKGGLVLEAMNNLIFEIFDVYSQICNGIAQVLLNIYETPAKPEASLALQVVKKAATHVEDLTQYFEICREMGVLNASQTLKLEKIPEEDIKDLEKIINGSVNFNGKDNGGEMRSELGNGSKRGLKTVITDKWERFDADCCSSTTLQVPFASCSSSHLSLVSKPVHKQDLPDLITF 1025
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 159789 165086 - Carg21983-RA Car04g00035 145460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00035 1025 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271|GO:0008272
Car04g00035 1025 MobiDBLite consensus disorder prediction 1 30 - -
Car04g00035 1025 ProSiteProfiles ENTH domain profile. 685 816 IPR013809 -
Car04g00035 1025 Pfam ANTH domain 692 948 IPR011417 GO:0005543
Car04g00035 1025 ProSiteProfiles STAS domain profile. 510 648 IPR002645 -
Car04g00035 1025 MobiDBLite consensus disorder prediction 1 28 - -
Car04g00035 1025 Pfam STAS domain 511 644 IPR002645 -
Car04g00035 1025 Pfam Sulfate permease family 101 261 IPR011547 GO:0016021
Car04g00035 1025 Pfam Sulfate permease family 265 459 IPR011547 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00035 Car-Chr4:159789 Car17g00760 Car-Chr17:6724810 0 dispersed
Car04g01889 Car-Chr4:10974692 Car04g00035 Car-Chr4:159789 0 dispersed
Car04g00035 Car-Chr4:159789 Car08g00573 Car-Chr8:3785602 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00035 K17471 - csv:101219163 1048.11