Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00047 ATGGAGTCATCGATCACGGATCCTTCTCTTCATTCCTTTCTGCGATTCTCTTCTTCTTCTTCTTCTGGGGAACCCGGCGCCATGACGTTGAAGACCATCAAGGTTCTCCAGAGGAATAATCTCCATCACTCACACGCCTCTGTGGACCCTCACAAGGTTAGTTTATTCGCCATAACCGGCTTTCTCGCAATCAGAATTTCAGAGGATAAGAAGATGGTTGACAAGGAATTTTTCACCGAATATGGTGAAGCTACTCAGTATGAAATTGAAGAAGTTATAGGCAAAGGGAGCTATGGGGTTGTTGCATCTGCCATAGACACTCACTCTGGCGAGAAAGTTGCCATCAAGAAGATAAATAATGTCTTCGAGCACGTTTCGGATGCTACACGGATTCTTAGAGAAATTAAGCTCCTCCGTTTTCTCCGGCATCCTGATATTGTTGACATAAAACATATAATACTCCCTCCTTCCAGAAGGGAGTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTCTGACCTTCATCATGTACTCAAAGCTAATGATGATCTCACCCCTCAACATCATCAATTTTTCTTGTATCAACTTCTTAGAGCCTTGAAGTATATACATTCAGCACATGTGTTCCATAGAGATTTGAAGCCAAAGAATATACTTGCCAATGCAGACTGCAAACTGAAGATCTGTGACTTTGGGCTTGCTCGTGCATCTTTTACTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGCTCCTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATATTCGCTGAAATGTTGGCAGGCAAGCCATTGTTTCCTGGGAATAGTGTTGTGCATGAGCTGGATCTAATAACTGATTTACTTGGTACTCCTTCGGCTGAATGCATTGCTAAGATTCGTAATGAAAAGGCTAAAAGATACTTGAATAGCATGAAAAAAAAGCACCCTATTCCTCTGTCAAGAAAGTTCCCTAATGCAGATCCACTAGCTCTTCATTTACTTGAGCGTCTGCTTGCATTTGATCCGGAGGATCGTCCTTCTGCTGAGGAGGCATTAGCTGATCCATATTTCCATGGGCTTGCAAATGTGGAGGATGAACCATCGAGGCAACCCATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAGTTAACCAAAAATGATGTCAGAGAGCTTATTTATAGAGAAATTTTAGAGTATCATCCTCAAATGCTACAGGAATACCTTCAAGGTTCTGAGAGTCACTTCTTGTATCCCAGTGGAATTGATCAATTCAAGCGTCAATTTGATCATCTGGAGGAACACTCTGGTAAAGGTGAGAGAGGCAGTCCGCTCCTGAGGAAGTATGTCTCCTTGCCTAGGGAGCGAATCTGTACACCAAGAGATGAAGATGATGATAATTGTAAAACAGAACAGAATGCAACTTCAGCTGAACCTGCAGCGCATCAAAGCACTCCTGGACCTGGTTATTCATTAACTGCTCTGAATGGTTCTGTTCAAGTAGACTGCAGCAATTACAACCTGTTGAGGAGTGCAAGTATTAGTTGCTCAAAATGGGTGGATTAA 1629 42.11 MESSITDPSLHSFLRFSSSSSSGEPGAMTLKTIKVLQRNNLHHSHASVDPHKVSLFAITGFLAIRISEDKKMVDKEFFTEYGEATQYEIEEVIGKGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLRHPDIVDIKHIILPPSRREFKDLYIVFELMESDLHHVLKANDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFTDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLAGKPLFPGNSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLNSMKKKHPIPLSRKFPNADPLALHLLERLLAFDPEDRPSAEEALADPYFHGLANVEDEPSRQPISKLEFEFERRKLTKNDVRELIYREILEYHPQMLQEYLQGSESHFLYPSGIDQFKRQFDHLEEHSGKGERGSPLLRKYVSLPRERICTPRDEDDDNCKTEQNATSAEPAAHQSTPGPGYSLTALNGSVQVDCSNYNLLRSASISCSKWVD 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 248661 253009 + Carg21995-RA Car04g00047 145472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00047 542 ProSitePatterns Protein kinases ATP-binding region signature. 93 117 IPR017441 GO:0005524
Car04g00047 542 MobiDBLite consensus disorder prediction 481 510 - -
Car04g00047 542 ProSiteProfiles Protein kinase domain profile. 87 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00047 542 MobiDBLite consensus disorder prediction 493 510 - -
Car04g00047 542 ProSitePatterns MAP kinase signature. 122 225 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car04g00047 542 Pfam Protein kinase domain 87 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00047 Car-Chr4:248661 Car11g00281 Car-Chr11:1535991 0 dispersed
Car04g00047 Car-Chr4:248661 Car04g00932 Car-Chr4:5344755 8.54E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88755 PF00069 Pkinase 1.00E-67 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00047 - - csv:101204645 822.772