Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00063 ATGAGTGAGGCCAAGTTGTTGGGTGGTGTGCAGCACAGAAATGTGGTTGCTTTGTTGGGATACTGTGTTCATGGTTCTGAGAAGCTACTGGTTTACGAGTACGTCTCCAATGAGAGCCTTGACAAGCTTCTCTTCGAATCCAGCAGACGTGGAGAGCTTGATTGGAAGAGGAGGTATGACATAATCGCTGGCATAGCACGAGGCTTGCAATATCTTCATGTAGATTCACATAATCTCATTATCCATCGTGATATCAAAGCTAGTAATATTTTGTTGGACGATAACTGGGTCCCTAAGATTGCTGATTTTGGAATGGCCCGTCTCTTCCCTGACGATCAAACTTATGTCAATACTCGTGTTGCTGGTACAAATGGATATATGGCTCCGGAATATCTAATGCAAGGTCGTCTATCATCAAAGGTAGATGTTTTTAGCTTTGGTGTCTTGGTCCTCGAACTCATCAGTGGCCAGCGTAACTCGTCATTTGGCACATATTTCGAAGCTGAAAACCTAATTGATTGGGCTTACAAGCTATATAAGAAGGGCAGGAGTTTGGAGATAATGGACCCAACATTAGCATCCTCAGCTGTTCCTGACCAAGTGGCGATGTGCATTCAGATTGGATTACTTTGCACACAAGGTGATCCAAAACTACGGCCGACCATGCCACGTGTGGTTTTGCTCCTCTCAAAGAGACCTGGTACTTTGGAGGAACCAACCAGACCAAGAATACTCGGTCCTCGACATACAAAATCTCATACCAAAACTGCATTCTCCTCCGATGTTGGAACTTCTGGTGTATCTTATTCCTCGGCTTTGACCACCAATACTGTAAGCGCGACCGAAATTGATTCTCGTGCTTCTTCAGTTAGTCGAGGACACGATACTCGGGGGAAACGCCCCGTGGAAGGATAA 915 45.36 MSEAKLLGGVQHRNVVALLGYCVHGSEKLLVYEYVSNESLDKLLFESSRRGELDWKRRYDIIAGIARGLQYLHVDSHNLIIHRDIKASNILLDDNWVPKIADFGMARLFPDDQTYVNTRVAGTNGYMAPEYLMQGRLSSKVDVFSFGVLVLELISGQRNSSFGTYFEAENLIDWAYKLYKKGRSLEIMDPTLASSAVPDQVAMCIQIGLLCTQGDPKLRPTMPRVVLLLSKRPGTLEEPTRPRILGPRHTKSHTKTAFSSDVGTSGVSYSSALTTNTVSATEIDSRASSVSRGHDTRGKRPVEG 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 335426 336829 + Carg22011-RA Car04g00063 145488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00063 304 MobiDBLite consensus disorder prediction 252 287 - -
Car04g00063 304 MobiDBLite consensus disorder prediction 237 304 - -
Car04g00063 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Car04g00063 304 Pfam Protein tyrosine and serine/threonine kinase 1 226 IPR001245 GO:0004672|GO:0006468
Car04g00063 304 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00063 304 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00063 Car-Chr4:335426 Car16g00582 Car-Chr16:3649898 2.35E-81 dispersed
Car04g00063 Car-Chr4:335426 Car04g00948 Car-Chr4:5460460 7.81E-164 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88756 PF07714 PK_Tyr_Ser-Thr 1.20E-38 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00063 - - cmax:111488095 487.648