Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g00068 | ATGGCTGAACTCTCGAATCTCTCCTCGAGCCCCAGTGAAGAAAGCGAGAAGAACGTGCTGCAGAAACACGTGGCGTTCTTCGATAGGAACCATGACGGCGTCGTTTATCCATGGGAAACCTTCAAAGGCTTCCGAGCGATCGGGGCGGGTTTGTTTCTGTCCTCCGTCAGTGCTTTTTTTATTAACATCGGACTCAGCTCCAAAACCCGACCCGGAAAATGTCCCAACTTTTTATTCCCAATTGTGATAAAGAACATTCACCTTGCCAAACATGGAAGTGATTCTGGTGTATATGATTCCGAAGGAAGGTTTGTTGCATTAAAATTTGAAGAAATTTTCAAAAAGCATGCGCTAACGTATCCGGATGCCTTAACCGAAAAAGAGCTTAAAGCGATGCTGAAAGCAAATAGAGAGCCGAAGGACTATAAGGGATGGATTGGTGCATGGGCAGAGTGGACAGCTCTATACATCCTTTGCAAAGATGAGAATGGATTGCTTACAAAGCAAACGGTGAAGGGTGTTTACGATGGAAGCTTATTCGAACATATGGAGAAACACAGAGTATCAAAGAAGAAGAAATGA | 582 | 44.16 | MAELSNLSSSPSEESEKNVLQKHVAFFDRNHDGVVYPWETFKGFRAIGAGLFLSSVSAFFINIGLSSKTRPGKCPNFLFPIVIKNIHLAKHGSDSGVYDSEGRFVALKFEEIFKKHALTYPDALTEKELKAMLKANREPKDYKGWIGAWAEWTALYILCKDENGLLTKQTVKGVYDGSLFEHMEKHRVSKKKK | 193 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 360528 | 362116 | - | Carg22016-RA | Car04g00068 | 145493 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g00068 | 193 | Pfam | Caleosin related protein | 16 | 183 | IPR007736 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g00954 | Car04g00068 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car05g00726 | Car-Chr5:5059573 | Car04g00068 | Car-Chr4:360528 | 6.94E-55 | transposed | |
| Car17g00126 | Car-Chr17:772639 | Car04g00068 | Car-Chr4:360528 | 3.10E-60 | transposed | |
| Car04g00068 | Car-Chr4:360528 | Car04g00954 | Car-Chr4:5497936 | 4.34E-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g00068 | K17991 | - | csv:101213829 | 321.242 |