Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00092 ATGGAGGTGAATCCGGGCATGGAGGAGGCCCTTTCTTTGATTCTTCGAGGGTGTTCCTTGGCCAGAGATTTTGAATCCAATCCTTTAAATTTCCGCAATAATATTAATTTCCTCGCTCGTTTTTGCGATGAGATTTTGGGCGTTTTCTCCGCCGCCAAGGAGCGCCTCAGTCGCCCTCAACACGAGTGCCTCAGGACCAGTACCTCCCAATCTATGGACTTGCCGCGGATTCAGATGAGGCCGCCGCCGTTCGACGATTCCGGGAATCTAACCGCAATGGGTTTTGGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTCTTTTTCTTCTTATTCTTCCACGTCAACCAAGGCTCGAAGACGAAAAGATGGAATGGCGAAGAGGACGGTGAGAGTGGCGGCGCCGCGCATCGGAAACACAGAGCTGCCACCGGACGACGGCTTTACATGGCGGAAGTATGGACAGAAGGAGATTCTTGGCTCCAGGTTTCCCAGAGGCTACTTCAGATGCACCCACCAGAAGCTCTACCACTGCCCAGCCAAAAAGCACGTGCAGCGCCTCGATCACGATCCCCACACGTTTGAAGTCGCCTACCTTGGTGACCACACGTGCCACATGTCCGCCACCGCCCCCTCCGCTCCACCACCGCCATCGCCGCTGCCGGAAGTTGCCGGGCTACACATGACCCAGTTCCCTCCCCCCTCCGCCGGATGGCTTTCGATGGAGTACGGGGGTCCGGCCACCATCCGGTCTAGCAAAGACGTCGGCGATCAGTTTCCGGTGTTGGACATGGTGGACGCCATGTTCAACTCCGGCACCGGCAGCAGTAACAGTGTAGACTCCATCTTCGGCGCTAATGTGGGGGAAGAACAACATCAGCATCACAAGTGGGAGAAAGACAACAAGAAGAATTAG 921 54.72 MEVNPGMEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSRPQHECLRTSTSQSMDLPRIQMRPPPFDDSGNLTAMGFGSSSSSSSSSSYSSFSSYSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSPLPEVAGLHMTQFPPPSAGWLSMEYGGPATIRSSKDVGDQFPVLDMVDAMFNSGTGSSNSVDSIFGANVGEEQHQHHKWEKDNKKN 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 520708 522689 - Carg24467-RA Car04g00092 145517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00092 306 ProSiteProfiles WRKY domain profile. 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g00092 306 MobiDBLite consensus disorder prediction 59 130 - -
Car04g00092 306 MobiDBLite consensus disorder prediction 281 306 - -
Car04g00092 306 MobiDBLite consensus disorder prediction 291 306 - -
Car04g00092 306 MobiDBLite consensus disorder prediction 91 117 - -
Car04g00092 306 Pfam WRKY DNA -binding domain 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00092 Car-Chr4:520708 Car08g00102 Car-Chr8:597679 7.90E-28 dispersed
Car04g00092 Car-Chr4:520708 Car04g00985 Car-Chr4:5683316 2.87E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3229 PF03106 WRKY 7.00E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00092 - - cpep:111779112 551.206