Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00094 ATGGAGGCTGCCGGTTCCTCTTCTTCTCAAAATGGGTACCAACCCCATGTTCTTGCTGTTGATGATAATCTCGTTGATCGTAAGCTCGTTGAGAAATTGCTCAAAAACTCCTCTTTTAAAGTGACAACAGCAGAAAATGGTCGCAGTGCTCTGGAGTTTCTGGGTTTGTCGGATGAACATGAACATGAACACAACAACATAGAATGCGGTGATAGGTCGAAGGTGAACATGATCATCACGGATTACTGCATGCCCGGAATGTCCGGATATGAACTCCTCAAGAAAATCAAGAGATGTTCGAGGATGAAGGAAGTTCCTGTAGTGGTGGTTTCATCAGAGAATGTGCCCACTCGCATCAACAAGTGTTTGGAGGAAGGAGCAGAGATGTTCATGCTCAAACCTTTGAAGCAATCTGATGTGGTGAAGCTCAAGTGCCAGCTGATGATGAACTGA 453 45.03 MEAAGSSSSQNGYQPHVLAVDDNLVDRKLVEKLLKNSSFKVTTAENGRSALEFLGLSDEHEHEHNNIECGDRSKVNMIITDYCMPGMSGYELLKKIKRCSRMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQLMMN 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 529756 530598 - Carg24469-RA Car04g00094 145519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00094 150 Pfam Response regulator receiver domain 17 142 IPR001789 GO:0000160
Car04g00094 150 ProSiteProfiles Response regulatory domain profile. 16 148 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00094 Car15g00917 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00094 Car-Chr4:529756 Car14g00475 Car-Chr14:2529750 3.15E-51 dispersed
Car04g00094 Car-Chr4:529756 Car03g00131 Car-Chr3:2281271 8.31E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3230 PF00072 Response_reg 1.90E-21 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00094 K14492 - csv:101208898 232.261