Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00105 ATGGAGGTTCTGATTAAGTGGGTCATCAACATCACCACCAAAAGAAAGATAAAAGCTAGAGAGTTTCAGCAAAGTGGGACTTTTGCTCTGTACTCGTTAATTTGCAGACATGCCAAAGTGAGCCTTCTTCCCAACAGACAAGTTGCAGACGAAGCACTTTCCACTTATTTACTTGAACATCCACCGGAGAAGAAGAAGCAATCTAAGGTTAAATTGCTGCTGGAGAAGCACAGTGCTCTGCACACTGCCTTGTTGATTCTTGTTCTTGTTGGGACTTGTATGGTGATTGGAGATGGGCTTCTCACTCCAGCCATTTCTGTTTTCTCAGCTGTTTCTGGACTTGAATTATCCATGACCAAGGCTCACCATCAGTATGCAGTGGTTCCAATCACATGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTATGGCACGCATCGTGTTGGCTTCTTCTTCGCTCCCGTTGTATTGATATGGCTACTCTGCATCAGTACCCTTGGCATATACAATATTATACAATGGAACCCACATGTTTATCAGGCTCTTTCTCCGTATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCGTTGGGTGGAATATTGTTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACCTTTCTGGTGTATCCAGCGCTCATATTGGCATACATGGGCCAAGCTGCTTACTTATCTCAACATCACACCACCACCAACAACATTGGCTTCTACGATTCTGTTCCAGGTCTAGCTGTAATGACTGTGATGCTTGTGACAACATGTCTTACATCTTTGGTGATTGTTCTCTGTTGGAACAAAACTCCCCTTTTGGCTCTCTCCTTTTTGATCTTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCCGGGAGGGCGCTTGGCTCCCCATTCTCTTAGCTCTCTTCCTCATGACCATTATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATATGATCTTCACAACAAGGTTTCATTGGAATGGTTGCTAGCATTGGGACCAAGCCTTGGGATTGCTCGTGTCCCTGGCATTGGATTAGTCTTCACTGATCTCACCTCTGGGCCAGCAGCACATCGGTCATACCGGTGCATTGTTCGATATGGCTACCGTGATAATCACCAGGACGTGGATTCGTTTGAATCTGAATTAGTCAAGAAACTGGCAGACTTTATCAGCTATGACTGGTACAGAAAACAAAGAGGCAACTCTAGCAGTGAGGACGATGCATCACGTTCAAATGAATCAACAAGTGAGCGTAGGCTGGCTGTGATCGGAACCGTAGCATTTGCAGGCGCATCTGCTTATGAAGAGACTATGCAGCCTGCAAGCGGATCAGTCGGGTTCCAAACTGTCGACAGCATCACTGATGTGATCGAAATGGAGCCACTGGGAGAAAAAAAGAGAGTCAGGTTTGCTATAGACGATGATTTTGAAGGTGACTCCCAATCTGAAACAGAAGCCCTTCTGCAGGAAGAGCTAGAAGATCTCGTAGCAGCCCAGCAATCAGGGACGGCGTTCATTCTCGGGCATTCACATGTCCGAGCTAAACAGGGATCGTCTCTGTTGAAGAGACTGGCCATTAACTATGGCTATAACTTTCTGAGAAGGAACTGCAGAGGCGCAGACGTTGCTCTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTGTAG 1785 45.38 MEVLIKWVINITTKRKIKAREFQQSGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSKVKLLLEKHSALHTALLILVLVGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFFFAPVVLIWLLCISTLGIYNIIQWNPHVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHTTTNNIGFYDSVPGLAVMTVMLVTTCLTSLVIVLCWNKTPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEYDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGPAAHRSYRCIVRYGYRDNHQDVDSFESELVKKLADFISYDWYRKQRGNSSSEDDASRSNESTSERRLAVIGTVAFAGASAYEETMQPASGSVGFQTVDSITDVIEMEPLGEKKRVRFAIDDDFEGDSQSETEALLQEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 572522 576871 + Carg24480-RA Car04g00105 145530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00105 594 Pfam K+ potassium transporter 23 269 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00105 Car-Chr4:572522 Car04g00269 Car-Chr4:1504596 0 dispersed
Car04g00105 Car-Chr4:572522 Car04g00999 Car-Chr4:5743448 5.37E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00105 K03549 - cpap:110819228 927.161