Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00131 ATGGCTTCCCATTCCCCTAATCTCGAGTGTCGGATGTACGAAGCCAAGTACCCCGAGGTCGACATGGCCGTCATGATCCAGGTCAAGAACATTGCTGACATGGGCGCTTACGTCTCTCTTCTTGAGTACAACAACATCGAGGGTATGATTCTCTTCTCCGAGCTCTCTCGCCGTCGTATTCGTAGTGTCAGCAGCTTAATTAGGGTCGGTCGAATCGAGCCCGTCATGGTCCTCAGGGTCGATAAGGAGAAGGGGTATATTGATTTGAGTAAGAGGAGGGTTTCTGAGGAGGATATTCAGGCATGTGAGGAGAGGTATAACAAGAGCAAGCTTGTTCACTCTATAATGCGCCATGTTGCTGAGACTGAAAATATTGATTTGGAGGACTTGTATATCCATGTTGGCTGGCCACTATACCGGAAATATGGTCATGCTTTTGAGGCATTCAAGGTTATTGTAACTGATCCTGATACAGTGTTGAATGCTCTCACCCGTGAAGTCAAGGAAGCTGGTCCTGATGGGCAAGAGGTAACTAAGGTAGTTCCCGCAATGTCTGAGGATGTAAAAGATGCGCTAATAAAAAATATTAGAAGAAGAATGACTCCTCAACCCCTGAAGGTTCGGGCTGATATTGAGATGAAGTGTTTCCAGTTTGATGGTGTTCTTCACATTAAGGAAGCAATGCGGAAAGCTGAGGCTGCTGGGAATGATGATTGTCCTGTTAAGATTAAATTGGTTGCTCCTCCACTCTATGTTCTTACGACCCAGACACTTGACAAGGAGCAAGGAATCACTGTTCTTGAAAAAGCAATCACTGCCTGCACGGAGGCAATCGAGCATCACAAGGGAAAGCTTGTAGTGAAGGAGGCACCTAGAGCGGTGAGTGAAAGAGACGACAAATTACTTGCTGAGCACATGGCAAAGCTACGACAAGACAACGAAGAGATCAGTGGCGATGAGGATAGTGAGGAAGAGGAAGACACTGGAATGGGAGAAGTCGATGTCGAAAATGCAGGTTCTGGGATCACCGAGTAA 1035 46.67 MASHSPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIRVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETENIDLEDLYIHVGWPLYRKYGHAFEAFKVIVTDPDTVLNALTREVKEAGPDGQEVTKVVPAMSEDVKDALIKNIRRRMTPQPLKVRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTLDKEQGITVLEKAITACTEAIEHHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVENAGSGITE 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 693565 698054 + Carg18385-RA Car04g00131 145556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00131 344 MobiDBLite consensus disorder prediction 309 344 - -
Car04g00131 344 ProSiteProfiles S1 domain profile. 21 92 IPR003029 GO:0003676
Car04g00131 344 Pfam S1 RNA binding domain 18 92 IPR003029 GO:0003676
Car04g00131 344 MobiDBLite consensus disorder prediction 316 332 - -
Car04g00131 344 Coils Coil 306 326 - -
Car04g00131 344 Pfam Eukaryotic translation initiation factor 2 alpha subunit 130 260 IPR011488 GO:0003723|GO:0003743
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00131 Car-Chr4:693565 Car04g01029 Car-Chr4:5904131 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00131 K03237 - csv:101209681 625.935