Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00139 ATGTGCGCAGTTGCAGTGCCGAAGACGACGACGACGATGACGAATTCATTATTCTCATCTCCAAAAATTGCTTCACTACTCTACAAGTCCTCGCTGAATTATTGTTGTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCGAGATCGGTGTCCAGTCCTAGGAAGCTTCATGTTTCTGCTTCCTCAACGTCGCTGTTGCCATCGACGCCGCAACTTCCGCCTTCTGTTTCGCCGTTGGCTGTTGATACGGTTTTGAAGAGGAAGAGGCCGGCAAGGATCAATGTTCCGCAGTCGATTGATTTTATTGGATTTGGATTTGAGCAACCGGAGGTGATGGAGGAGGAAGAGGAAGAATACTCGGTTTATTGTAAAAGAGGAAGAAGACGCATCGCCGTGGAGGATCGATTCTCAGCCACTGTTGGAATTCAAGGAGATTCTCGACAGGCTTTCTTCGGAGTTTACGACGGGCATGGCGGAGCAAAAGTGGCGGAAATCGCAGCTAAAAGAATGAGCGAGAACGTGATCGATCAAGTGACGAGAAGAACCGATTCGGAACTTGAGGAAGCAATCAAAGACGGTTATCTCGCCACCGATCGGGAAGTATCAGAGGAAGGCGTCAGTGGCGGAGCCTGTTGCGTGGCCGCATTGATTCGGAACGGAAATCTCGCAGTCTCGAACGTCGGTGATTGTCGTGCCGTGTTGAGCCGAAGGGGAAAAGCCGAAGCCCTAACCTCCGACCACCGCCCTTGCAGAGAAGACGAGAGAAACCGGATCGAAAATTTGGGCGGTTACGTAGACTATTGCCGTGGTGCGTGGAGAGTTCAAGGAACATTAGCTGTATCGCGAGCCATTGGAGACGATCATCTGAAACAGTGGGTGATATCGGAACCAGAGACGAGAATGGTGAAGATTGAGGACGATTGTGATTTCTTGATCCTTGCTTCTGATGGATTTTGGGACAAGGTTAAAAATCAGGAAGCAGTAGACATAGTACAGAGCCTTTGCGGCGTAGAGATGGAGAAGCCAAAGCTATTCGCAGCCTGCAAAGAGCTAGCCGCCTTGTCAACATCACGAGGCTCAGTGGACGACACCACTGTTATGATCATCAAATTGTCCTCATTTCTCTGA 1149 49.26 MCAVAVPKTTTTMTNSLFSSPKIASLLYKSSLNYCCSSPSSSSSSSSSSSSSSPRSVSSPRKLHVSASSTSLLPSTPQLPPSVSPLAVDTVLKRKRPARINVPQSIDFIGFGFEQPEVMEEEEEEYSVYCKRGRRRIAVEDRFSATVGIQGDSRQAFFGVYDGHGGAKVAEIAAKRMSENVIDQVTRRTDSELEEAIKDGYLATDREVSEEGVSGGACCVAALIRNGNLAVSNVGDCRAVLSRRGKAEALTSDHRPCREDERNRIENLGGYVDYCRGAWRVQGTLAVSRAIGDDHLKQWVISEPETRMVKIEDDCDFLILASDGFWDKVKNQEAVDIVQSLCGVEMEKPKLFAACKELAALSTSRGSVDDTTVMIIKLSSFL 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 749146 750871 - Carg18377-RA Car04g00139 145564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00139 382 MobiDBLite consensus disorder prediction 40 79 - -
Car04g00139 382 MobiDBLite consensus disorder prediction 40 77 - -
Car04g00139 382 ProSiteProfiles PPM-type phosphatase domain profile. 125 378 IPR001932 -
Car04g00139 382 Pfam Protein phosphatase 2C 146 370 IPR001932 -
Car04g00139 382 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00617 Car-Chr1:3616119 Car04g00139 Car-Chr4:749146 9.22E-121 dispersed
Car04g00139 Car-Chr4:749146 Car15g00023 Car-Chr15:232537 2.98E-77 dispersed
Car13g00028 Car-Chr13:259015 Car04g00139 Car-Chr4:749146 1.62E-119 wgd
Car04g00139 Car-Chr4:749146 Car04g01034 Car-Chr4:5923487 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00139 K17506 - csv:101208170 475.707