Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00148 ATGACGAGATTACCCCTTCTCACCGCCGCTATCCCCGTCATCTCTTTCATCGCTTTCGTTTTCCCTCTGCTTCCGGCGACCTTAGCTCTCGGCTCTGCCTCCACGCTTGCTGTCAGCTACGGTTCCGCCACCGTCTGCGGCATCGTCGCTGAGCAGCCCACGCAAAGGATTCTCTGCTTCCGTCGCGGTCAAACCATTTTTATTGACCCAAATATTTCCTTCTCCGTCGTCTCCGGCGGTCGGGATACCTTCTGCGGCATAAGAGCCGGCGGCTATACTCTTCTCTGCTGGGACTTTGATCAAAATACCGCTGCGTTTTCCCGGAGAAGGCTTTACTTCAACTCCACTGTCCTTCTCGAGAATCTCGCCGTCGGTGACGACCAAATCTGTGCCACCGTGGTCGGTGCCGGCAATGCAACTTGCTGGCGCGATGGTAACAACGTGCGAGTTGGATTTTCTTCTCTTCAATTCGATTCAATTTCTTCTGGGTTTGGATTTTCTTGCGGAATTTTGAAGGGAAATCAATCCGTTCGATGTTGGGGTCGGAATTCGTCGATTGCGGCCCTAATCGAAAATGGGTTTCGAAATATCTCATTGTCGACTATCGTCGCCGGTGGGTTTCATGCTTGTGGATTGAATATCTCCGGTGGGTTGGTTTGTAGGGGGAACAACGATTTTGGGCAGTTGGATTTTCCTTCTAATTCATCCAGAGGGTTCTCTGAATTGGCCCTCGGCGAACGCCATAGCTGTGGGATTTTGCTCTCGAATCGATCGGTCGTTTGTTGGGGAAGCTCAGATTTCTCTGTGGATTCAATTCGAGAAACTTCTTTTGAGTTAATTTCTTCGGGATCGGATTTCGTTTGTGGATTAACGACGAGTAATTTCTCTGTTCTTTGTTGGGGGCCTGGCTGGTCGAACGATTCTTCTGGTCATTTTTCACTTTCTCTTCCTAAGATTCTTCCTGGTCCTTGTGTTCAATCTTCTTGTCGGGATTGTGGTGTTTATCCTCTCTCTCAAACGCTCTGTTCTGATTCTGGGAATGTCTGTAATCGTTGTTTGGTTACTGTTTCACCGCCGTTTTCGCCAATACCGCCCTCGCCGCCGCCAATGGTGATGATCCCATCACCTCCTCCAGCGGCATTGAGAAAGGGTTTGCTGGCTTTTGCTATTGTGGGCTCAGTTGGGGCCGTTGCTGGGATTTGTACTGTTGTTTACTGTTTATGGACTGGTGTTTGTTTTGGTCATAAGAAGATACACAACTCTGTTCAGCCGACCATTACTCGAGCTGCTAGCTCAAATGGTGGGACGACAACGTCAAACACGAACAACAGCCCGCCATCGCGGTCATCGACGATTCGGCGACAAGGGTCTCGAATAATGCGGAGGCAGAGGAGTGGTACGTCCTCGAAGCACGCCGATAGAGCAGAAGAATTCACTCTGGCTGAGCTTGCTTTGGCTACCAATGACTTCTCCCATGAGAACAAGATTGGTGAAGGGAGCTTTGGCATTGTGTACCGTGGGAAACTCAGCGATGGGCGTGAGGTTGCGATCAAGAGAGGCGAAACGGGGCCGAAGACAAAGAAGTTTCAGGAGAAGGAGAGTGCTTTTGATTCAGAATTGGCGTTCTTGTCTAGACTTCATCACAAGCATTTGGTGAGGCTTGTGGGGTATTGTGAGGAGAAAGATGAGCGGCTTTTGGTTTATGAGTATATGAAGAATGGTGCACTTTACAATCATCTTCATGACAAGACCAACTCTGAAAAGGGTAGCAGTGTTGTGAACTCTTGGAAGATGAGGATCAAAATTGCTTTAGATGCAGCAAGAGGAATTGAATATCTTCATAACTATGCAGTCCCTCCTATAATCCATAGGGATATCAAATCATCCAACATTCTTCTCGATTCAAATTGGATAGCGAGAGTATCCGATTTCGGGTTGTCGTTGATGAGCCCCGGGTCAGACCTTGATTACCGACCGACGAAGGCAGCTGGGACGGTTGGTTACATTGATCCTGAGTACTATGGACTGAACGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGGGTGGTGTTGCTGGAGCTTTTGACAGGGAAGAGAGCTATATTTAAGGATGATGAGCAAGGAGGGACACTGGTGAGCGTGGTCGATTTTGCAGTGCCTGCGATTACGATCGGAGAACTGGGGAAGATTTTGGATCCAAGAGTCGGGCCGCCGCAGATGAACGAAGCAGAGGCAGTAGAGCTTGTGGCTTACACAGCGATGCACTGCGTGCGTTTGGAAGGGAAAGATCGGCCAACGATGATTGACATTGTTGTGAATTTGGAACGAGCTTTGAATCTTTGTGATGATAGTCATGGCAACAGCTCTAGTGGTGGAATTTCCATTGTTTCAGAGTGA 2400 48.79 MTRLPLLTAAIPVISFIAFVFPLLPATLALGSASTLAVSYGSATVCGIVAEQPTQRILCFRRGQTIFIDPNISFSVVSGGRDTFCGIRAGGYTLLCWDFDQNTAAFSRRRLYFNSTVLLENLAVGDDQICATVVGAGNATCWRDGNNVRVGFSSLQFDSISSGFGFSCGILKGNQSVRCWGRNSSIAALIENGFRNISLSTIVAGGFHACGLNISGGLVCRGNNDFGQLDFPSNSSRGFSELALGERHSCGILLSNRSVVCWGSSDFSVDSIRETSFELISSGSDFVCGLTTSNFSVLCWGPGWSNDSSGHFSLSLPKILPGPCVQSSCRDCGVYPLSQTLCSDSGNVCNRCLVTVSPPFSPIPPSPPPMVMIPSPPPAALRKGLLAFAIVGSVGAVAGICTVVYCLWTGVCFGHKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSSTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELALATNDFSHENKIGEGSFGIVYRGKLSDGREVAIKRGETGPKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKTNSEKGSSVVNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWIARVSDFGLSLMSPGSDLDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTLVSVVDFAVPAITIGELGKILDPRVGPPQMNEAEAVELVAYTAMHCVRLEGKDRPTMIDIVVNLERALNLCDDSHGNSSSGGISIVSE 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 814857 817256 + Carg18368-RA Car04g00148 145573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00148 799 Pfam Protein kinase domain 491 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00148 799 ProSiteProfiles Protein kinase domain profile. 490 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00148 799 MobiDBLite consensus disorder prediction 429 473 - -
Car04g00148 799 MobiDBLite consensus disorder prediction 429 454 - -
Car04g00148 799 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Car04g00148 799 Pfam Regulator of chromosome condensation (RCC1) repeat 159 184 - -
Car04g00148 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00148 Car-Chr4:814857 Car14g01313 Car-Chr14:11132889 5.00E-15 dispersed
Car09g01094 Car-Chr9:11105458 Car04g00148 Car-Chr4:814857 8.32E-135 transposed
Car13g00036 Car-Chr13:314538 Car04g00148 Car-Chr4:814857 8.05E-20 wgd
Car04g00148 Car-Chr4:814857 Car04g01042 Car-Chr4:5982640 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88760 PF00069 Pkinase 1.20E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00148 - - bhj:120081574 1309.28