Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00208 ATGTCCTCACCGGTGAACCTCACCGATAATTTCTCCGGCGACGATGTACATGAATGGATGTTAGGCAACTTGCTTGAATTGTCCTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGGTGTTTAACTGATGGAGAGATGAACTATGATAGTTCCTCTAGAATTGAAAACAAGCGTGGCCATCAATGGTTTATGGATGGCAGTGCACCAGAGTTATTCAGTAGCAAGAAGCAAGCAATAGAAACTGTAAATACTAGAACTGTTCCAGGCGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAAGTTTTCAATCAGTTCCTGGGCCCTTCACTGATCGCCTCTTTGGCTCCGAGCCAATACGAACAGTCAATTTGGTTGATAGAAGCATCACTGTTGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTTGAGAATCATTTTGCAAACAACCCGTCAGTTGGCTTGTCCATGTCACAATCCATTGAGGATCCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAGGTTAAAGTCAATCAAGTCAGGGACGCTGACATTGGCATGTCTGCCTCTTTGGGACATGCCTATAGCAGCAGGGGTGATGGTACAGTTTCAATGGGTACAGCATTTAAGAAAATTCATGAGAACGCCATATCATTGGGCCAATCTTATAATAGTAGAGATGAGAATAGCATCTCGGTTGGCCCTGCATATCACAAGACAGATGATAGTTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGAAATTTTATTACAAATGGTCATAACTATAGCAAGGGAGACAATAGCATCCTATCGATGAGTCAGCCTTTTGACAAGGGGGATTACTCTTTTATTTCAATGGGTCAGTCTTATGAGAAGGCAGAAGGCAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCATGAAAATTTTATCTCAATGGGGCCAGCCTATAGTAAGGCAGGTGATACTTTCATTTCAATGGCTTCCCCCTATAATAAGGGAAATGATGATATATCAATGGGTCCAACCTATGACAAGGTGAACTCTGATATTGTACATGTGGGTCCCAAATATGACAAAGCAGATACTGGTGCTGTGTCTATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGGTTTGATGATGAGAATGCGGCGGATAATCCATCTGGTGGGATCATTAGCAGTTACGACTTGTTGATGGCTAATCAGGCTTCTGCCCAAGCATCAGAAGTGTCAAACCTGAGAGATTCAGTTGATCCTCATGCGGAAGTAAACTTTAATAATGCTACAAAAGTTGATGTTAAGATTGACACAAGTTCCAAGAATAAAGAGCCTAGGACGACTAAGAAGGTGCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATATTTGTGCAGCTGTGACAACTGCAATCATTCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAACAATCACATCTATTTTGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTGAAGAACACCCCTCAGGAGTTGTTATTTGATGTAATTCAGAATGTGACTGGTTCTCCCATTAATCAGAAGAATTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGACGAAGTAACTATTCCTTCTTGA 1830 41.37 MSSPVNLTDNFSGDDVHEWMLGNLLELSFQHKSFWIPRDAGCLTDGEMNYDSSSRIENKRGHQWFMDGSAPELFSSKKQAIETVNTRTVPGVPHMNVSPWENTSSFQSVPGPFTDRLFGSEPIRTVNLVDRSITVGNANMDMGRKEFENHFANNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDADIGMSASLGHAYSSRGDGTVSMGTAFKKIHENAISLGQSYNSRDENSISVGPAYHKTDDSFISMGHAFSKGDGNFITNGHNYSKGDNSILSMSQPFDKGDYSFISMGQSYEKAEGNIISFGASYNKGHENFISMGPAYSKAGDTFISMASPYNKGNDDISMGPTYDKVNSDIVHVGPKYDKADTGAVSMAHNYHKGESNTISFGGFDDENAADNPSGGIISSYDLLMANQASAQASEVSNLRDSVDPHAEVNFNNATKVDVKIDTSSKNKEPRTTKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQELLFDVIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVTIPS 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1159173 1165257 - Carg23797-RA Car04g00208 145633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00208 609 Pfam Tify domain binding domain 502 557 IPR032308 -
Car04g00208 609 MobiDBLite consensus disorder prediction 451 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00208 Car-Chr4:1159173 Car02g01151 Car-Chr2:7906975 1.65E-17 dispersed
Car14g00139 Car-Chr14:648141 Car04g00208 Car-Chr4:1159173 3.18E-44 wgd
Car02g00597 Car-Chr2:4517071 Car04g00208 Car-Chr4:1159173 1.78E-20 wgd
Car20g00370 Car-Chr20:2061582 Car04g00208 Car-Chr4:1159173 5.51E-40 wgd
Car04g00208 Car-Chr4:1159173 Car04g01102 Car-Chr4:6347091 0 wgd
Car04g00208 Car-Chr4:1159173 Car06g00270 Car-Chr6:1526693 6.45E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00208 - - cmax:111472013 1201.04