Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00215 TTTTCGTACTTCTTGGGCTTCTTTGAGTTATTGTCTGCGGCTTGTGGTGCGGGCATGGTGGGCTCTGAGGAGGACTCTGCTACTGCTGGGGACGCAGTGCAGCTTTCTGGTGGAAATCGGAAATTGTTCTGGCGCTCGGCTTCTTGGTCTGCATCACGGTCCTCCCTTCACCATCCTGATGTGAACAAAGATGGTGGAGACACCAGTGGGCATCTTGGAGATAGTAATGGAACAAGCCGAGTTTTCCATTCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAGCCTTTGTCGATAGCCCGGCGGAGCTTGGATGAGTGGCCCAAAGCGGGGTCGGACGACATAGGGGAGTGGCTGCAACCTCCTACTCCAAGTGGGAGAGGAAATGGGGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAACCCGGATAAGAATTGTGGGCTTGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGCTCGAAAGTGGCGGATCATGTATATCTTGGTGGAGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAACGGAATTACTCATGTGTTGAATTGTGTAGGATTCGTTTGCCCGGAGTACTTCAAAGATGATTTCGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATCACTAGCATTCTGTATGATGTTTTTGACTACTTTGAAGATGTTAGAGAACAAAGCGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCCCGGTCAACGTCGTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTAAAGGCAGCAAGAGGTATTGCTGACCCGAATATGGGTTTCGCTTGCCAATTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCATTGTTGAGGATGTATAGAGTTGCCCCACACTCACCATATGATCCTTTGCATCTCGTCCCCAAAATGTTGAATGACCCTTCACCATCTGCACTCGATTCTAGAGGTGCTTTTATCATTCATATACCATCTGCCATATTTGTTTGGATTGGTAAGAACTGTAAAGCAATCATGGAAAGGGATGCAAGGGGGGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAATAAACTTTTGGGATTCCTTTGCAAACCTGTTACCTCTAATGGATAAATCCAACAGTAAAATCAATCCTGGGGAGTTAAAAGGTAAACCTTATCCAGGCGAGAGGAAAGTCGATTCCTATGATGTGGACTTTGAAATTTTTCAGAAGGCTATAACTGGTGGTTTTGTTCCTCCATTTCCTTCATCTGCGAACGAGCACGAAACCCATCTTCCTGTTAGAGAAAGCAATTGGAGTATGCTTAGGCGTAAGTTTGCCTCAGGAAACATGAAAGATTTCATATCAGCTCCTCGAGTATCTCTGTCTAGGGTCTATTCAGACTCGTCGATGATGGTGCATTTTTCTGCAAAATCCTCATCGCCTTCAACGTTTTCTTTGTCTTCATCATCTTCTTCACCAATCTATCTTTCTCCAGATTCCCTCTCTTCTGATTCAGGTTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAGTCCTCTTTAGATTCTCCATCTGCATCTTCACCTTCAGTTCCAGCTTCTTCATCTCTGTCTAGTTTTTCTAACATGTCTCTTATCTCATCCAATAGTTCCTTAGAATCTGTGCCCAATGGTCCCGAAACTCGTGATGCAGTCCTCTTGGAATCGAGTTCTCACTCACTCTCATTCTCATCTAAAAAGTTCTCACCGTCTCTTGCAGAACGCCGAGGTAGTTCAAAGTCTCTGACATTGCCTACAATGCCCAGTAAAATCAGAGCAACAAATAGTGCCTCAAGATTTCTTGCCACTCAAGAAGATAGTAAGAGGAAAAACAAGAATTCTTTCTCTCTTAATGTATTAATTAATATGAAAAATGACTCAGAGCCTACAGATAGGGTTGCAAATGAACAGACAAGTTCCACTCAGAATTTCAAGAATTTTGAAAATGGAATCGACGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAAAGTTGATGCACAATCTACTAGTTCATGGAAAAGCTATCCCAAACCTTTTGAAAAAGGCATGCTATCCACCACTGTGTCTGGGAAGCAAGATGGTGAGTTTGTCCAACCTATGGTATACTGTTGGCCGGAATTAGAAAGGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTTTAGCGATCTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTTTATGTGGGTAGGAAGTTCTTTTGACCATGATTTATCTCAGGTTCGAGTAAAGAGGGATAACGACTTGGTTGATTTAGAGAAGATAGACTGGGTTAAAGTTGGTCAATATATACTTACTGAAGTAGGTCTGCCAGAAAATGCAGAAATTAAGATCGTTAAAGACGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGTCTGTTGTAG 2619 43.3 FSYFLGFFELLSAACGAGMVGSEEDSATAGDAVQLSGGNRKLFWRSASWSASRSSLHHPDVNKDGGDTSGHLGDSNGTSRVFHSPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWLQPPTPSGRGNGERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVADHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCKAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPINFWDSFANLLPLMDKSNSKINPGELKGKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSANEHETHLPVRESNWSMLRRKFASGNMKDFISAPRVSLSRVYSDSSMMVHFSAKSSSPSTFSLSSSSSSPIYLSPDSLSSDSGSSSSSSSKYFSESSLDSPSASSPSVPASSSLSSFSNMSLISSNSSLESVPNGPETRDAVLLESSSHSLSFSSKKFSPSLAERRGSSKSLTLPTMPSKIRATNSASRFLATQEDSKRKNKNSFSLNVLINMKNDSEPTDRVANEQTSSTQNFKNFENGIDVRVGSVASCQQETKVDAQSTSSWKSYPKPFEKGMLSTTVSGKQDGEFVQPMVYCWPELERIAAFDTSYLNSKAALAIFSPSRYLGKKDDMMLFMWVGSSFDHDLSQVRVKRDNDLVDLEKIDWVKVGQYILTEVGLPENAEIKIVKDGEETEEFLARLSLL 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1194765 1199303 - Carg23789-RA Car04g00215 145640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00215 872 ProSiteProfiles Dual specificity protein phosphatase domain profile. 171 313 IPR020422 GO:0006470|GO:0008138
Car04g00215 872 MobiDBLite consensus disorder prediction 69 94 - -
Car04g00215 872 ProSitePatterns Tyrosine specific protein phosphatases active site. 255 265 IPR016130 GO:0016311|GO:0016791
Car04g00215 872 MobiDBLite consensus disorder prediction 120 139 - -
Car04g00215 872 MobiDBLite consensus disorder prediction 54 95 - -
Car04g00215 872 Pfam Dual specificity phosphatase, catalytic domain 179 309 IPR000340 GO:0008138|GO:0016311
Car04g00215 872 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 230 291 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00215 Car-Chr4:1194765 Car04g01803 Car-Chr4:10336560 0 dispersed
Car10g00014 Car-Chr10:76162 Car04g00215 Car-Chr4:1194765 4.48E-20 transposed
Car04g00215 Car-Chr4:1194765 Car04g01109 Car-Chr4:6379608 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00215 - - csv:101223210 1399.03