Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00218 ATGGCCATTGAAGTTGCTGTCAAGGCTGCCGTTGGTGCACTCAATGTCATCGGAGACTGTCCTTTCACTCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACATATTGCATCTCATCAATTTATCCGATAAACCCTGTTGGTTCTTGGGAGCTAGCCCAGAAGGGAAGGTGCCGGTGGCGAAGATTGATCGTCAATGGGTTCCTGATTCTGATGCTTTGCTTAGAGAGCTGAAGGCATTGGACAAGCATCTCATGGCTTATGGTCCTTATGTCGCTGGAGCGAAGGTAAGTGCTGTTGATTTGAGTCTGGCTCCAAAGTTGTACCATCTTGATATTGCTCTTGCCCATTTCAAGAACTTTCATGTCCCCCAAAACTTAGCCTGTTTATCTGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGCCCCGGAACATGTAATTCTGGGTTGGGAGGCCAAGGTGAATGCTGCATGA 501 46.91 MAIEVAVKAAVGALNVIGDCPFTQRVLLTLEEKKVPYILHLINLSDKPCWFLGASPEGKVPVAKIDRQWVPDSDALLRELKALDKHLMAYGPYVAGAKVSAVDLSLAPKLYHLDIALAHFKNFHVPQNLACLSAYKKLLFARESFVKTKAAPEHVILGWEAKVNAA 166
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1218395 1220111 - Carg23786-RA Car04g00218 145643
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car04g00218 166 Pfam Glutathione S-transferase, N-terminal domain 20 81 IPR004045 -
Car04g00218 166 Pfam Glutathione S-transferase, C-terminal domain 76 128 - -
Car04g00218 166 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00218 Car-Chr4:1218395 Car14g00753 Car-Chr14:4211907 1.07E-56 dispersed
Car04g00218 Car-Chr4:1218395 Car04g00219 Car-Chr4:1220319 2.98E-30 tandem
Car04g00218 Car-Chr4:1218395 Car04g01111 Car-Chr4:6400060 1.16E-80 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00218 K21888 - cmax:111483829 251.136