Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g00218 | ATGGCCATTGAAGTTGCTGTCAAGGCTGCCGTTGGTGCACTCAATGTCATCGGAGACTGTCCTTTCACTCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACATATTGCATCTCATCAATTTATCCGATAAACCCTGTTGGTTCTTGGGAGCTAGCCCAGAAGGGAAGGTGCCGGTGGCGAAGATTGATCGTCAATGGGTTCCTGATTCTGATGCTTTGCTTAGAGAGCTGAAGGCATTGGACAAGCATCTCATGGCTTATGGTCCTTATGTCGCTGGAGCGAAGGTAAGTGCTGTTGATTTGAGTCTGGCTCCAAAGTTGTACCATCTTGATATTGCTCTTGCCCATTTCAAGAACTTTCATGTCCCCCAAAACTTAGCCTGTTTATCTGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGCCCCGGAACATGTAATTCTGGGTTGGGAGGCCAAGGTGAATGCTGCATGA | 501 | 46.91 | MAIEVAVKAAVGALNVIGDCPFTQRVLLTLEEKKVPYILHLINLSDKPCWFLGASPEGKVPVAKIDRQWVPDSDALLRELKALDKHLMAYGPYVAGAKVSAVDLSLAPKLYHLDIALAHFKNFHVPQNLACLSAYKKLLFARESFVKTKAAPEHVILGWEAKVNAA | 166 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1218395 | 1220111 | - | Carg23786-RA | Car04g00218 | 145643 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g00218 | 166 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 81 | IPR004045 | - | |
| Car04g00218 | 166 | Pfam | Glutathione S-transferase, C-terminal domain | 76 | 128 | - | - | |
| Car04g00218 | 166 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g00218 | Car-Chr4:1218395 | Car14g00753 | Car-Chr14:4211907 | 1.07E-56 | dispersed | |
| Car04g00218 | Car-Chr4:1218395 | Car04g00219 | Car-Chr4:1220319 | 2.98E-30 | tandem | |
| Car04g00218 | Car-Chr4:1218395 | Car04g01111 | Car-Chr4:6400060 | 1.16E-80 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g00218 | K21888 | - | cmax:111483829 | 251.136 |