Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00219 ATGGCCCTCGAAGCTGCGGTCAAGGCTGCCGTGGGTGCGCCCGATCTTATTGGGGACTGCCCTTTCAGCCATCGGGTCCTGTTAACTTTGGAGGAGAAGAAACTTTGCTACGAAGTGCATCTCATTAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCCGGAGGGAAGGTGCCGGTGGTGAAGTTTGATGACAAATGGGTATCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTACCCTGAGCCTTCTCTTGTTTCTCCCCCTGAATTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTCGTGAAAATGTTGAAGAGCAAGGACCCGAATGATGGTTCGGAGCTGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGTATGTGTGTTGAGTATATCAAACAACTATATTAAAGCATTTATGATTTTACTCCTCATTTTCGCCTATGCCATGCGGTTCCAGGGTCCTTATGTTGCTGGAGAGAAGGTCACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACAATCTCGATATTGCTCTTGGCCATTTCAAGAAGTGGATATTCCCTGTAAACTTGAACAGTTTATCCAAATACAAAGAGCTGCTTTTCGCTCGAGAATCTTTCATGAAGACAAAGGTTGCCCCAGAACACGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCTGCAGAACCTGTAATTTCTGATAGTGAGCCCAAGGTGAATGCTGCTGCAGAACCTATAATTTCAGATAGTGAGCCCAAGGCGAATGCTGTCGCAGAACATGTAGTTTCTGATAGTGAGCCCAAGGCCATTGAGGTTGCTGTCAAGGCTGCTGTTGGTGCACTCGATGTTATTGGAGACTGCCCTTTCGCTCAGAGGGTTCTTTTGACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCGATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCGGTGGCCAAGATTGACGACAAATGGGTTCCCGACTCCGATGTCATTGTCGGGATTCTTGAGGAGAAGTATCCCAAGCCTATTCTTGCGACTCCACCCGAATTTTCTTCTGTGGGATCAAAGATAAGTGGTGCTTTTGTAAAATTCTTGAAGAGTAAGGACCCGAACGATGGTTCGGAGCAGGCTTTGCTTGAAGAATTGAAGGCGTTGAACGAGCATCTCAATGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTTACCGCTGTTGATTTGAGTCTGGCACCGAAGCTTTACCATCTTGATGTCGCACTTGGCCATTTCAAGAAGTGGATTTTCCCTGAAAACTTAACCAGTTTATCCAAATACAAAGAGTTGCTTTTCGCTCGAGAATCGTTTGTGAAGACGAAGGCTGCCCCAGAACATGTAATTTCTGGTTGGGAGGCCAAAGTGAATGCTGCATGA 1485 46.26 MALEAAVKAAVGAPDLIGDCPFSHRVLLTLEEKKLCYEVHLINLSDKPSWFLEVSPGGKVPVVKFDDKWVSDSDVIVGILEEKYPEPSLVSPPEFSSVGSKINGAFVKMLKSKDPNDGSELALLEELKALDEHLKAHVCVLSISNNYIKAFMILLLIFAYAMRFQGPYVAGEKVTAVDLSLAPKLYNLDIALGHFKKWIFPVNLNSLSKYKELLFARESFMKTKVAPEHVISGWEPKVNAAAEPVISDSEPKVNAAAEPIISDSEPKANAVAEHVVSDSEPKAIEVAVKAAVGALDVIGDCPFAQRVLLTLEEKKVPYKWHLIDLSDKPSWFLEVSPEGKVPVAKIDDKWVPDSDVIVGILEEKYPKPILATPPEFSSVGSKISGAFVKFLKSKDPNDGSEQALLEELKALNEHLNAHGPYVAGEKVTAVDLSLAPKLYHLDVALGHFKKWIFPENLTSLSKYKELLFARESFVKTKAAPEHVISGWEAKVNAA 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1220319 1224567 - Carg23785-RA Car04g00219 145644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00219 494 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Car04g00219 494 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Car04g00219 494 Pfam Glutathione S-transferase, N-terminal domain 300 368 IPR004045 -
Car04g00219 494 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 347 493 IPR010987 -
Car04g00219 494 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 291 369 IPR004045 -
Car04g00219 494 Pfam Glutathione S-transferase, C-terminal domain 399 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00219 Car-Chr4:1220319 Car04g01111 Car-Chr4:6400060 1.43E-118 dispersed
Car04g00218 Car-Chr4:1218395 Car04g00219 Car-Chr4:1220319 2.98E-30 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00219 K21888 - cmax:111483829 848.195