Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00230 ATGGGAGCTTCAAACCTCCATTTTCTCATCTGGGTTCTTTGTGCTCTGTGTTTAAGATCATCTCTCTCATCAGGATTCTCTCCTGATGATAATTTTCTGATCGATTGTGGATCAACCTCCAATATAACAGTGGGAGGTCGTCTATTTCAACCTGATGGATTTTTCTCTGACAATCTTTCAAACCCGAATGGGAAATTTGTTTCCACTGCTAGCAAAGTTTCTAGTTCATCTCCACTGTTCTTATTCTCTCATCTCTTTCAAACTGCAAAAGTATTTGAAACAACTTTTGAATACAATTTCAAAATCAAGAAACAGGGCAGGCACTGGATCCGCCTCTACTTTTACCCTTTTGTTTACGAAAACTTCAATTTGAGTTTAGCCAAATTCTCAGTTTCTGCTCAAAATATCACCCTTCTCAAAGAGTTTCAGATCGAGAGCGGCTCGATAATCAAGGAGTATTCTCTGAATGTCACTTCTAGTAATCTTGTTCTTACATTCACTCCCATGGTGAATTCATTTGCCTTCATCAATGCTTTGGAAGTTGTTTCTGTTCCTAATGAATTGATTCCTTTGGTTGTCCCTACTGTTGAGAAGATAGTAGAAAGTTTGGGGAATAGGGCATTGGAGACAGTTGCTAGAGTGAATATGGGCAACGAAACCGTGCCTCCGAGTAACGATACTCTCTCGCGCCTTTGGGTAGCAGATGGTCCATTCTTGATGCATAACAATCAGGCTGTTGCTGGGAGGTTTGTGTCGAATCTCACGAGAGTGAACATGACAACAGACTCTGAGATTATGGCTCCTCGTTCTGTGTATGGAACAGCAACTCAGTTAGGGGCTGAACCGGATGCGAATGCTAATATTAACGTATCATGGTCCTTTGATGTCGATCCAGGCTATGAATATCTGATTCGTTTTCACTTCTGTGATATTTTAGATCTTTCTTTTGGATCGCTGTTCTTTAATGTTTTCGTGAACTCGTGGATGGTTAAAGATCATCTTGATCTTAATAATGTCACTTCAGGCATCATAGGTGCACCTTATGTCCTGGACACCATAGCCAGTTCAATTGACAGCTCTAAATTCAAAATAAGTGTTGGCCCTTCCAGTTTTCATGAGTACTCAGCTGCAATCCTTAACGGACTCGAGATCATGAAAATAAGCGATTCTCGGGGGAGTCTTGATGAACCCCCCTTTGATATACACTCGAAGAATAGTTCCAATGTGAAAGTAGGTCTCATAGCAGGCTTGGTTGCTGGACTGGTAGCTGCTATTTTGGTCACGCTCGTCGTCGTACTGTGTCGACGAAGAAGGAAAGCAGGGCTCGTCGGTTATTTGAAGGAAGAGGAAAATTTTGGTGTGAATGGAAGAGAAAGCAACTATGTCATTGGATCTGTTGGTTATAAATATCCTCTTGCAGCCATTTTGGAAGCTACTGATCATTTTAGTGAAAGTTTAGTCATTGGCCATGGCGGGTTTGGGAAGGTTTTCAAGGGAATGCTGAGGGACAACACGGAAGTGGCAGTGAAACGAGGGGCCTCGAAGTCTCAGCAGGGTCTTGCCGAGTTCCGAACCGAAATCGAGATGCTATCCCAATTTCGCCACCGGCATTTGGTATCTCTGATCGGGTACTGCGACGAGCAAAATGAGATGATTATTATCTACGAATACATGGAAAAAGGCAGTCTCAAGGACCATTTGTATAGCTCAGAACTTCCAAGTTTAAGCTGGAAACAAAGGCTTGAGATATGCATTGGCTCAGCCAGAGGGCTTCACTATCTCCACACTGGCTCCACAAAGGCAATCATACACAGAGATGTCAAAACTGCAAACATTCTCCTAGATCAAAACTACATGGCTAAAGTTGCAGACTTCGGGCTCTCGAAAACTGGCCCCGAGTTCGATAAGACTCATGTTAGTACAGCAGTAAAAGGGAGCTTTGGCTATCTTGATCCCGAGTACTTAACAACGCAGCAGCTGACTCAGAAATCCGATGTGTACTCATTCGGCGTTGTTATGTTCGAAGTCCTTTGCGGTAGGCCTGTCATTGATCCATCTCTTCCAAGGGAAAAGGTGAATTTGATTGAGTGGGTAATGAAGAGGAAGGATAGAGATGAACTGGAGGCCATTGTAGACGCTTGTATTGTCAAGCAAATCAAGCTAGATTCTCTGAAAAAGTACGTAGAAACAGCTGAGAAATGCTTGGCGGAGTGCGGCATGGATCGCCCAACAATGGGAAACGTTCTGTGGAATCTGGAGTGTGCACTTCAGCTCCAAGGAGATGAAAAGTCTAGCCATGGCAAGGAATCATCCTCACAAGCTGACCTTTCGAACCACTGGGAGGCGAGCGTATCGACCACTCAATTCAGCACGGGGAGTGCGGTCGATATCGCCGGTATCTCGATGAGTAAGGTGTTTGCTCAAATGGTGAGGGAAGATATGAGATAG 2448 43.83 MGASNLHFLIWVLCALCLRSSLSSGFSPDDNFLIDCGSTSNITVGGRLFQPDGFFSDNLSNPNGKFVSTASKVSSSSPLFLFSHLFQTAKVFETTFEYNFKIKKQGRHWIRLYFYPFVYENFNLSLAKFSVSAQNITLLKEFQIESGSIIKEYSLNVTSSNLVLTFTPMVNSFAFINALEVVSVPNELIPLVVPTVEKIVESLGNRALETVARVNMGNETVPPSNDTLSRLWVADGPFLMHNNQAVAGRFVSNLTRVNMTTDSEIMAPRSVYGTATQLGAEPDANANINVSWSFDVDPGYEYLIRFHFCDILDLSFGSLFFNVFVNSWMVKDHLDLNNVTSGIIGAPYVLDTIASSIDSSKFKISVGPSSFHEYSAAILNGLEIMKISDSRGSLDEPPFDIHSKNSSNVKVGLIAGLVAGLVAAILVTLVVVLCRRRRKAGLVGYLKEEENFGVNGRESNYVIGSVGYKYPLAAILEATDHFSESLVIGHGGFGKVFKGMLRDNTEVAVKRGASKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEQNEMIIIYEYMEKGSLKDHLYSSELPSLSWKQRLEICIGSARGLHYLHTGSTKAIIHRDVKTANILLDQNYMAKVADFGLSKTGPEFDKTHVSTAVKGSFGYLDPEYLTTQQLTQKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLIEWVMKRKDRDELEAIVDACIVKQIKLDSLKKYVETAEKCLAECGMDRPTMGNVLWNLECALQLQGDEKSSHGKESSSQADLSNHWEASVSTTQFSTGSAVDIAGISMSKVFAQMVREDMR 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1279295 1281742 + Carg23774-RA Car04g00230 145655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00230 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Car04g00230 815 Pfam Malectin-like domain 34 387 IPR024788 -
Car04g00230 815 ProSiteProfiles Protein kinase domain profile. 482 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00230 815 Pfam Protein tyrosine and serine/threonine kinase 487 698 IPR001245 GO:0004672|GO:0006468
Car04g00230 815 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00230 Car-Chr4:1279295 Car09g00807 Car-Chr9:4886675 0 dispersed
Car02g00610 Car-Chr2:4609613 Car04g00230 Car-Chr4:1279295 0 wgd
Car20g00382 Car-Chr20:2130744 Car04g00230 Car-Chr4:1279295 5.39E-103 wgd
Car04g00230 Car-Chr4:1279295 Car04g01310 Car-Chr4:7613607 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88761 PF12819 Malectin_like 1.70E-32 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00230 - - csv:101203398 1298.88