Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00246 ATGTTGAATCTTAACGATTTGATTATCAACTGCGATGAAACTTCGACGAATCGGACTGTAATGGAAGATTCTGAGACGTCGAATTCTTCTGTCGTGAATGCCGATGAGGTCTGCAACAGTAGAGATGAAGATTCCTCTGTTTTAATCTTCAATATTCTGAAAAGGGAAAATTCCGGCGGTGGTGGAGGTGGTGCGTCGCCGGAATTAGTGACTCAGGCGCTCTTTCCAGTGGCTGGAGGGTGGGGAGAAACTGGGTCTCCGGTTCCGAAGTCCCATTGGTTGAACCTGTCGTCGACCGGTGATTTTGTCGGCGAAGGCGTCGGTGGAGGAACTGCAGAGCTGAAAATTGTGCAGCAGAAACAGCAGCAGGTGAGGAAGAGCCGCCGTGGGCCGCGGTCCCGGAGTTCCCAGTACCGGGGAGTTACTTTTTACCGGCGCACCGGAAGATGGGAATCTCATATTTGGGATTGTGGGAAACAAGTTTATTTAGGTGGGTTCGACACTGCCCATGCTGCAGCAAGGGCATATGATCGAGCAGCGATCAAATTTAGGGGAGTAAATGCAGATATAACGAGGTCGACAATGGTAGATGCAAACAATGGAGGCAATGGGCATAATCTTGATCTAAGCATTGGAGGAATTTTCAACTACCATTTAAGAAATTCTTCCCAAAACCTCAACATTCAAACACCAAAGAAAGAAAACAATGGTGGTGGTGGGTATGGTGTGGGTGGACAACAGCCGCATATTCCTCCTATGTGGTCTGGAAAGAAGAGAGAGGAGAAGCTACCCGTCAAAGACCCTTACGAGCTCGGGATGGCCAATGGCAATGCCGATATCGATGCCGATGTCGGTTCAAGAAAATGGGAGTAA 873 48.68 MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNILKRENSGGGGGGASPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNADITRSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKENNGGGGYGVGGQQPHIPPMWSGKKREEKLPVKDPYELGMANGNADIDADVGSRKWE 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1393292 1395643 + Carg25664-RA Car04g00246 145671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00246 290 ProSiteProfiles AP2/ERF domain profile. 137 193 IPR001471 GO:0003700|GO:0006355
Car04g00246 290 MobiDBLite consensus disorder prediction 228 290 - -
Car04g00246 290 Pfam AP2 domain 137 185 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00246 Car-Chr4:1393292 Car02g00621 Car-Chr2:4684407 4.49E-08 dispersed
Car04g00246 Car-Chr4:1393292 Car04g01331 Car-Chr4:7718546 1.51E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3244 PF00847 AP2 3.30E-10 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00246 K09284 - csv:101204131 273.863