Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00277 ATGTCTGTATCGATTTCCAACTGCTTCTCTGATTTGCTCTGCCAGGAGGATTCCTCCGGCGTCTTGTCTGGCGAATCGCCGGGATGTTCTTCCGACCTCGACTCACCGGCCTGCGTCGAGGAATCTATCGCCGTCTTCATCAAGGACGAGCGTCACTTCGTCCCCGATTACGACTGTTTGTCGCGCTTTCAATCTCCGTCGCTGGATGCGGCCGCTAGATTAGACTCTGTTGCATGGATTCTTAAGGTTCAAGTCTATTACGGTTTTCAGCCGTTGACGGCGTATCTCTCCGTCAACTACTTGGATCGATTCCTTTGTTCACGGCGTTTGCCGATTCAGGATGCTCATCGCGAGATTCTACAAACTAATGGGTGGCCTTTGCAACTACTCTCTGTTGCTTGCCTCTCACTGGCTGCTAAAATGGAGGAACCTCTTGTTCCTGCTTTACTGGATCTTCAGGTTGAGGGGGCCAAATATATATTTGAACCCAGAACAATATGCAGGATGGAATTACTGGTGCTGAGGGTATTGGATTGGCGGCTGCGCTCTGTTACGCCGTTCAATTTCATCGCATTCTTTGCTTGCAAGCTCGATCCATCTGGGGATTTCATAGGGTTTCTTATTTCAAGAGCCACAGAAATTATAATATCAAATATCCGAGAGGTAATCTTTCTGGAGTACTGGCCATCGTGTATAGCGGCGGCCGCCTTGCTTTGTGCAGCGAATGAAGTCCCGAATTTGTCTGTTGTGAATCCAGAGCATGCTGAATCATGGTGCAGTGGTCTAAGGAAAGAAAATATCATCGGCTGCTACCGGTTAATGCAAGAGATTGTGCTTGATAGTTGCCGGATCAAGTCCCCCCAAATCCTACCTCAGTTTAGAGTGACAGTCCGCACTAGAATGAGATCCAGCGACTTATCCCCCTACTCCTCCTCTTCTTCCTCATCTTCGTCATCACCAAACAAAAGGAGAAAATTAAACCAGAGCCTCTGGGTAGGTGATGACAAAGACAACCCCGAAGAATGA 1026 48.34 MSVSISNCFSDLLCQEDSSGVLSGESPGCSSDLDSPACVEESIAVFIKDERHFVPDYDCLSRFQSPSLDAAARLDSVAWILKVQVYYGFQPLTAYLSVNYLDRFLCSRRLPIQDAHREILQTNGWPLQLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRMELLVLRVLDWRLRSVTPFNFIAFFACKLDPSGDFIGFLISRATEIIISNIREVIFLEYWPSCIAAAALLCAANEVPNLSVVNPEHAESWCSGLRKENIIGCYRLMQEIVLDSCRIKSPQILPQFRVTVRTRMRSSDLSPYSSSSSSSSSSPNKRRKLNQSLWVGDDKDNPEE 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1565989 1568832 - Carg07976-RA Car04g00277 145702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00277 341 MobiDBLite consensus disorder prediction 303 341 - -
Car04g00277 341 Pfam Cyclin, C-terminal domain 184 281 IPR004367 -
Car04g00277 341 Pfam Cyclin, N-terminal domain 43 181 IPR006671 -
Car04g00277 341 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Car04g00277 341 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00277 Car-Chr4:1565989 Car16g00277 Car-Chr16:1723405 6.83E-61 dispersed
Car09g00243 Car-Chr9:1338747 Car04g00277 Car-Chr4:1565989 4.58E-36 dispersed
Car05g00808 Car-Chr5:7675842 Car04g00277 Car-Chr4:1565989 7.39E-154 transposed
Car12g00689 Car-Chr12:4772655 Car04g00277 Car-Chr4:1565989 1.78E-130 transposed
Car04g00277 Car-Chr4:1565989 Car04g01638 Car-Chr4:9440369 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00277 K18810 - csv:101209417 565.844